Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 HMGB1P16-201ENST00000447155 540 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 RPS20P32-201ENST00000456044 356 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AC010618.1-201ENST00000469924 477 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 RPL7P24-201ENST00000493052 752 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 PTGES3P3-201ENST00000511479 482 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AC008494.2-201ENST00000514544 370 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 RNA5SP309-201ENST00000516670 106 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AC079610.2-201ENST00000604818 690 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 RNA5SP108-201ENST00000605921 117 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AC025016.1-201ENST00000616746 682 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AL162233.1-201ENST00000620014 944 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 ZNF90P1-201ENST00000480493 1951 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.01□□□□□ -1.77
LRRC40Q9H9A6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
LRRC40Q9H9A6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LRRC40Q9H9A6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LRRC40Q9H9A6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LRRC40Q9H9A6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LRRC40Q9H9A6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4□□□□□ -1.77
LRRC40Q9H9A6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
LRRC40Q9H9A6 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 RPS26P8-201ENST00000393490 348 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 OR8G2P-201ENST00000412796 908 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 MTND4P24-201ENST00000424002 397 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 RPL7P4-203ENST00000430239 730 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 TRIM60P13-201ENST00000432350 1283 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 HMGB1P48-201ENST00000446155 598 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC069540.1-201ENST00000446320 988 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 AL500522.2-201ENST00000448562 343 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC104689.1-201ENST00000473356 768 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC010342.1-201ENST00000514047 877 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 SNORA48.9-201ENST00000516419 162 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4□□□□□ -1.77
LRRC40Q9H9A6 HMGB1P23-201ENST00000518743 568 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 OR5AK3P-201ENST00000527486 1297 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 CENPUP2-201ENST00000555897 1186 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 AC138649.5-201ENST00000637456 137 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 MIR492-201ENST00000638676 116 ntBASIC4□□□□□ -1.77
LRRC40Q9H9A6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LRRC40Q9H9A6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4□□□□□ -1.77
LRRC40Q9H9A6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AP002001.2-201ENST00000529025 1469 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC119744.1-201ENST00000454746 1715 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC007685.1-201ENST00000329806 452 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 RNA5SP322-201ENST00000363617 119 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 OR52E6-202ENST00000379946 954 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 RNU6-1293P-201ENST00000384077 107 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AL022722.2-201ENST00000402519 180 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 RNU2-21P-201ENST00000410368 188 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 RN7SKP56-201ENST00000410513 331 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms