Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AC027281.1-201ENST00000574178 758 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AC104581.5-201ENST00000624171 7141 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 RNU1-70P-201ENST00000362618 164 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 MIR887-201ENST00000401258 79 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AC005189.1-201ENST00000431286 310 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 RNA5SP445-201ENST00000515889 115 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 RNU6-579P-201ENST00000516879 102 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 CYP4A43P-201ENST00000568156 121 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 ZNF90P1-201ENST00000480493 1951 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AL391417.1-201ENST00000404100 426 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 RNA5SP229-201ENST00000410809 99 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 BX276092.3-201ENST00000424182 230 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 RN7SL585P-201ENST00000470538 280 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 OR7M1P-201ENST00000608946 533 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AC092435.3-201ENST00000565538 3654 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AL356535.1-201ENST00000440335 398 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 SUMO2P20-201ENST00000520803 283 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 MIR4425-201ENST00000580572 84 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 AC128687.2-201ENST00000609657 566 ntBASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD1Q96PZ7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 RNU4-47P-201ENST00000410876 114 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 RN7SL863P-201ENST00000462370 296 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 PSMA2P1-201ENST00000526365 646 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 AC079089.3-201ENST00000603094 673 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 AL353600.1-201ENST00000608148 251 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 MTCO1P8-201ENST00000416914 1523 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 AC073069.1-201ENST00000428657 441 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 CBX1P4-201ENST00000439415 457 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 RPS29P31-201ENST00000446147 164 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 IFNA11P-201ENST00000446352 526 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 H3F3AP1-201ENST00000559984 334 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 AC138965.3-201ENST00000623875 498 ntBASIC2.84□□□□□ -1.95
CSMD1Q96PZ7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 EEF1A1P41-201ENST00000414667 207 ntBASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 UBL5P3-201ENST00000475112 231 ntBASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 PPBPP1-201ENST00000510807 373 ntBASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 SETP12-201ENST00000514068 805 ntBASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 NDUFB9P3-201ENST00000521269 501 ntBASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 GMCL1P2-201ENST00000605230 823 ntBASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 AL592295.2-201ENST00000612578 206 ntBASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
CSMD1Q96PZ7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 DDX6P1-205ENST00000441966 1436 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms