Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RAD23BP3-201ENST00000454157 1152 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 MTND1P12-201ENST00000455231 147 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 RPS20P24-201ENST00000457473 361 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC022215.1-201ENST00000481770 362 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC114967.1-201ENST00000504890 259 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 CYCSP22-201ENST00000517555 339 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC078899.1-201ENST00000521432 1185 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC112191.2-201ENST00000522428 333 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AP000859.1-201ENST00000525536 307 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AP001284.1-201ENST00000528393 2118 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 OR5AN2P-201ENST00000534535 896 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC107954.1-201ENST00000565906 727 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 MAGOH2P-202ENST00000584384 429 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC103792.1-201ENST00000603591 919 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AL035413.2-201ENST00000604801 525 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC009237.17-201ENST00000618111 748 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC127024.6-201ENST00000621598 424 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AP002505.2-201ENST00000623585 696 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC140134.1-201ENST00000511830 3544 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 AC134882.1-201ENST00000603738 1676 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 CCT4P2-201ENST00000233836 1548 ntBASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD1Q96NR3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC006026.1-201ENST00000444025 1803 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 Y_RNA.481-201ENST00000384373 102 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 HMGB1P20-201ENST00000402555 677 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 GAPDHP42-201ENST00000406848 981 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 MTND3P17-201ENST00000416968 344 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 REREP1Y-201ENST00000422655 198 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 RPL12P16-201ENST00000431098 498 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC073410.1-201ENST00000435125 589 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 RPS3AP54-201ENST00000435535 734 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 REREP2Y-201ENST00000439103 200 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 CALM1P1-201ENST00000442082 433 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 SBDSP1-204ENST00000453858 737 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC004129.2-201ENST00000457229 287 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 RPS17P15-201ENST00000475609 349 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 PPIAP19-201ENST00000486414 492 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 RPL32P33-201ENST00000487023 394 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC021678.3-201ENST00000517893 476 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC139365.2-201ENST00000517972 253 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AP003181.2-201ENST00000528941 181 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 NPM1P42-201ENST00000560329 862 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC090312.1-201ENST00000580637 348 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC006115.2-201ENST00000596823 202 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AL162413.1-201ENST00000603198 110 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC025449.1-201ENST00000603896 529 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC087283.1-201ENST00000604029 1074 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 BNIP3P10-201ENST00000605360 577 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC090948.2-201ENST00000607363 564 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 RNU6-87P-201ENST00000607561 108 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 RN7SL544P-201ENST00000617232 284 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 RN7SL763P-201ENST00000620922 284 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AC112487.2-201ENST00000637950 304 ntBASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCHD1Q96NR3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms