Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CYCSP11-201ENST00000436426 315 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 CNOT7P2-201ENST00000441051 832 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 RPS7P5-201ENST00000441482 581 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AC015724.1-201ENST00000478577 156 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 SETP14-201ENST00000497538 873 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 TCP11X3P-202ENST00000514289 1254 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AC008802.1-201ENST00000519121 791 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AC079075.1-201ENST00000559543 878 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AL606834.2-201ENST00000602954 668 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHAMP1Q96JM3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 PABPC1P9-201ENST00000426076 1612 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 RNY3P14-201ENST00000384309 102 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 SNORD116-23-201ENST00000384645 92 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 MIR548F1-201ENST00000408667 84 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 SNORA77-201ENST00000408716 125 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 OR8G2P-201ENST00000412796 908 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 RPL36AP10-201ENST00000421785 322 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 C4BPAP2-201ENST00000428434 478 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 ARPC3P2-201ENST00000457786 533 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 RN7SL481P-201ENST00000477764 299 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 RPS4XP15-201ENST00000489210 795 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 BNIP3P41-201ENST00000503774 571 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 SNX5P1-201ENST00000505757 1041 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 RNY4P37-201ENST00000516225 96 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 RNU6-885P-201ENST00000516607 104 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AP000676.2-201ENST00000529711 301 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC068993.1-201ENST00000546724 589 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 TRAV15-201ENST00000556680 249 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC084757.1-201ENST00000559987 490 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC068135.2-201ENST00000569293 1028 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 CYCSP40-201ENST00000575927 294 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 MIR4330-201ENST00000579077 105 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 MIR3936-201ENST00000584304 110 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC069307.1-201ENST00000602820 447 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC087763.1-201ENST00000603391 286 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC024941.1-201ENST00000612250 334 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC023509.5-201ENST00000617434 807 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC018926.3-201ENST00000618841 406 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AL079343.1-201ENST00000572358 1771 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC068870.3-201ENST00000625077 2536 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 AC009643.2-201ENST00000603543 1448 ntBASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHAMP1Q96JM3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC046144.1-201ENST00000478559 1853 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms