Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 MTND5P33-201ENST00000571250 1450 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 PWAR1-201ENST00000624188 2414 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AC016583.1-201ENST00000624221 2431 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 Y_RNA.216-201ENST00000364205 93 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 RNU6-996P-201ENST00000365438 107 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 SNORA4.3-201ENST00000365564 137 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 MIR559-201ENST00000385188 96 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 RPS15AP12-201ENST00000419498 388 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 MTCYBP8-201ENST00000422855 651 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 RPL7AP14-201ENST00000424041 802 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 DUTP6-201ENST00000425573 462 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 RPL23AP72-201ENST00000492447 435 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 RPL37P23-201ENST00000492641 294 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AC093677.1-201ENST00000514414 678 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AC068831.4-201ENST00000556118 109 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AC087763.1-201ENST00000603391 286 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AL355816.1-201ENST00000607951 118 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 MIR6721-201ENST00000617181 87 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 MIR6811-201ENST00000620409 58 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AC009318.4-201ENST00000620496 486 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 AL442128.2-201ENST00000620246 1824 ntBASIC6.43□□□□□ -1.38
SCG3Q8WXD2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCG3Q8WXD2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 MSL3P1-202ENST00000440028 1468 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 RNU6-28P-201ENST00000362378 107 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 RNU6-1160P-201ENST00000384546 104 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 U3.43-201ENST00000410734 213 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 GSTM3P2-201ENST00000412746 530 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 HMGA1P8-201ENST00000414130 321 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 CYP4F30P-202ENST00000420048 405 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC096632.1-201ENST00000427395 310 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AL356276.2-201ENST00000435919 558 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC005297.2-201ENST00000450430 606 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC104339.1-201ENST00000465478 348 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC018797.3-201ENST00000513388 1241 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 SCARNA24.1-201ENST00000516465 137 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 RN7SKP256-201ENST00000517201 314 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AP000907.2-201ENST00000530827 353 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 TOMM20P1-201ENST00000534518 427 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC007494.1-201ENST00000562293 760 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC092332.1-201ENST00000563684 829 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC026898.1-201ENST00000586404 571 ntBASIC6.42□□□□□ -1.38
SCG3Q8WXD2 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.42□□□□□ -1.38
SCG3Q8WXD2 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms