Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RPL21P5-201ENST00000554662 472 ntBASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 AC005668.1-201ENST00000571142 476 ntBASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 AC011840.5-201ENST00000582125 771 ntBASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 AC005357.1-201ENST00000588399 301 ntBASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 AC022893.3-201ENST00000607665 437 ntBASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 AC084781.2-201ENST00000615568 161 ntBASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.69□□□□□ -1.34
NEDD1Q8NHV4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 LINC01963-201ENST00000562038 3148 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 NMD3P1-201ENST00000439704 1488 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 RNA5SP132-201ENST00000364725 118 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 GNG5P2-201ENST00000372054 207 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 RNA5SP91-201ENST00000390902 119 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 RAD23BP1-201ENST00000421404 1227 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 BEND7P1-201ENST00000422058 457 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AC018638.3-201ENST00000461273 132 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 HMGN2P26-201ENST00000463169 339 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AC091564.1-201ENST00000464563 479 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AC108078.3-201ENST00000502633 489 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 HMGB3P15-201ENST00000507326 574 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 RN7SKP256-201ENST00000517201 314 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AP000790.1-201ENST00000528891 737 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AL596327.1-201ENST00000603629 213 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 NANOGP3-201ENST00000605855 286 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AL133481.2-203ENST00000607558 139 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AC109309.2-201ENST00000612597 332 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AL157817.1-201ENST00000614264 790 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AL034546.1-201ENST00000623740 3693 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 AC109780.1-201ENST00000451768 1344 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 TAB3P1-202ENST00000452645 1634 ntBASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD1Q8NHV4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 Y_RNA.149-201ENST00000363558 117 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 RN7SKP44-201ENST00000363602 316 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 RN7SKP124-201ENST00000364730 341 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 RNU6-1263P-201ENST00000384601 106 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 SNORD65-201ENST00000391079 73 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 RNU6-510P-201ENST00000391239 108 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 RPL23AP29-201ENST00000397284 453 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 GAPDHP42-201ENST00000406848 981 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 RN7SKP229-201ENST00000410465 302 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 HMGB1P11-201ENST00000413899 637 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AC017078.1-201ENST00000416146 368 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 MTCO2P27-201ENST00000420740 428 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AL450023.1-201ENST00000450868 751 ntBASIC6.67□□□□□ -1.34
NEDD1Q8NHV4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms