Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 AC025574.1-201ENST00000554784 1653 ntBASIC5.37□□□□□ -1.55
NUP43Q8NFH3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP43Q8NFH3 CDC27P2-201ENST00000425026 1922 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 RNU1-39P-201ENST00000383897 165 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 MIR130A-201ENST00000385274 89 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AL356432.1-201ENST00000405809 419 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 OR9R1P-201ENST00000412200 877 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 RPL22P17-201ENST00000438729 315 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 MTCYBP6-201ENST00000441810 138 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 RPS23P9-201ENST00000448848 438 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 PPIAP20-201ENST00000449839 135 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 HIGD1AP8-201ENST00000453927 274 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 RPL7P6-201ENST00000480903 738 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 NIPA2P2-201ENST00000496376 1083 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC114781.3-201ENST00000512083 142 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC108471.1-201ENST00000513977 287 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 RNU6-202P-201ENST00000515998 96 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC078814.3-201ENST00000553036 491 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC018638.8-201ENST00000588755 281 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 MIR98-201ENST00000606724 119 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 RNU6-87P-201ENST00000607561 108 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC068722.2-201ENST00000618734 544 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC002550.2-201ENST00000621246 394 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC079776.5-201ENST00000641920 211 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 CCT4P2-201ENST00000233836 1548 ntBASIC5.36□□□□□ -1.55
NUP43Q8NFH3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUP43Q8NFH3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 AC092070.2-203ENST00000598377 3644 ntBASIC5.35□□□□□ -1.55
NUP43Q8NFH3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 CASC19-204ENST00000641001 2055 ntBASIC5.35□□□□□ -1.55
NUP43Q8NFH3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 AL645937.1-201ENST00000641739 1652 ntBASIC5.35□□□□□ -1.55
NUP43Q8NFH3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 Y_RNA.166-201ENST00000363730 102 ntBASIC5.35□□□□□ -1.55
NUP43Q8NFH3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUP43Q8NFH3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms