Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 SNORD109A-201ENST00000459128 67 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 SEC11B-201ENST00000518383 499 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC105227.2-201ENST00000615075 605 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 MAPK6PS3-201ENST00000403865 2162 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AL356057.1-202ENST00000402263 756 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC234778.2-201ENST00000566241 354 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC069209.1-201ENST00000619282 651 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC127502.3-201ENST00000636170 1206 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 IGHVIII-44-202ENST00000636235 289 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 DPPA2P2-201ENST00000418220 897 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 RNA5SP116-201ENST00000516132 98 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 NPM1P5-201ENST00000557228 838 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 HMGB1P6-201ENST00000569046 646 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AL359535.1-201ENST00000612100 1087 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC092184.1-201ENST00000625042 715 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 NMD3P1-201ENST00000439704 1488 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC134882.1-201ENST00000603738 1676 ntBASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HMCN2Q8NDA2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 RNA5SP99-201ENST00000364020 114 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 OR2AS1P-201ENST00000427827 319 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AC124916.1-201ENST00000444020 547 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AL513328.1-201ENST00000446460 224 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 VN1R40P-201ENST00000455196 941 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 SEPT7P6-201ENST00000469999 1143 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AL031658.2-201ENST00000616850 651 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 Y_RNA.796-201ENST00000364268 102 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 Y_RNA.799-201ENST00000364992 102 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 RNU11-201ENST00000387069 134 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AC128716.1-201ENST00000475129 166 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 RNA5SP24-201ENST00000516478 95 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 CYCSP28-201ENST00000534284 321 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AC023161.2-201ENST00000551218 780 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AC018552.3-201ENST00000567416 561 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AL360012.1-201ENST00000602813 131 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 SAGE2P-201ENST00000420011 2126 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 Y_RNA.355-201ENST00000365462 98 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 SDCBPP2-201ENST00000424643 885 ntBASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN2Q8NDA2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms