Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 AP000790.1-201ENST00000528891 737 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 CBX3P5-201ENST00000552017 521 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AL138976.2-201ENST00000563989 694 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC127024.5-201ENST00000580085 462 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC044792.1-201ENST00000593294 196 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC015712.7-201ENST00000615211 635 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 MIR6721-201ENST00000617181 87 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC010338.1-201ENST00000621823 717 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC139792.3-201ENST00000623525 224 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC091905.1-201ENST00000624400 311 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC006065.6-201ENST00000625201 545 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC138915.3-201ENST00000562908 1389 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 CASC19-246ENST00000641625 1606 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.11□□□□□ -1.59
DTX3Q8N9I9 AC112198.2-201ENST00000426589 6996 ntBASIC5.11□□□□□ -1.59
DTX3Q8N9I9 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 RNU6-249P-201ENST00000363016 102 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 RNU6-984P-201ENST00000363236 109 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 RN7SKP145-201ENST00000363291 303 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 RNA5SP346-201ENST00000363541 121 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 RNA5SP433-201ENST00000364491 114 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AL157702.1-201ENST00000398764 426 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 MIR1275-201ENST00000408770 80 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 RNA5SP487-201ENST00000410186 122 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 MYL6P5-201ENST00000412707 459 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AL096829.1-201ENST00000413677 457 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 HMGB3P20-201ENST00000417997 600 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 RPS15AP30-201ENST00000420976 390 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 RAD23BP1-201ENST00000421404 1227 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 NMD3P2-201ENST00000421815 761 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AL513185.2-201ENST00000425543 193 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AL445669.1-201ENST00000426743 755 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 RPL31P35-201ENST00000431058 377 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 RPL17P49-201ENST00000443728 411 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 ARPC3P5-201ENST00000448802 534 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 HIGD1AP8-201ENST00000453927 274 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 PMCHL2-203ENST00000457791 237 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 RN7SL197P-201ENST00000466981 299 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 PFN1P6-201ENST00000476786 399 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC013356.1-201ENST00000489027 564 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 NENFP3-201ENST00000503735 313 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC018797.1-201ENST00000510791 255 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC034159.1-201ENST00000513885 583 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 HSD3BP3-201ENST00000514706 994 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 Y_RNA.672-201ENST00000516289 104 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AP004607.3-201ENST00000530354 3915 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AC006512.2-201ENST00000543250 486 ntBASIC5.1□□□□□ -1.59
DTX3Q8N9I9 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.1□□□□□ -1.59
DTX3Q8N9I9 MIR4502-201ENST00000580432 81 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms