Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AL392088.2-201ENST00000637607 285 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC012078.1-201ENST00000405035 1646 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SYNE4Q8N205 AC011503.2-201ENST00000594230 1500 ntBASIC5.58□□□□□ -1.52
SYNE4Q8N205 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE4Q8N205 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNE4Q8N205 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE4Q8N205 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE4Q8N205 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE4Q8N205 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE4Q8N205 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE4Q8N205 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE4Q8N205 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE4Q8N205 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 SNORA62.3-201ENST00000365110 153 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 OR5H15-201ENST00000383696 930 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 SNORA11.2-201ENST00000408318 127 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 BTF3P8-201ENST00000414577 526 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AL590806.1-201ENST00000415818 853 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 COX7BP2-201ENST00000437976 242 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 MTND4P25-201ENST00000441039 533 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC233982.1-201ENST00000451247 436 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 RPL12P26-201ENST00000452430 487 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 RPS20P4-201ENST00000461659 355 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 BZW1P2-201ENST00000473537 826 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC026782.2-201ENST00000510845 636 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC116353.3-201ENST00000511215 249 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC104417.1-201ENST00000523974 751 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC109635.6-201ENST00000525487 1113 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE4Q8N205 SETP1-201ENST00000556014 845 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC095057.3-201ENST00000567102 1157 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 AP001269.3-201ENST00000588718 329 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 AC068944.2-201ENST00000610373 403 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SYNE4Q8N205 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNE4Q8N205 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.57□□□□□ -1.52
SYNE4Q8N205 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SYNE4Q8N205 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SYNE4Q8N205 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SYNE4Q8N205 AL158163.1-201ENST00000603915 1649 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SYNE4Q8N205 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SYNE4Q8N205 MIR372-201ENST00000362225 67 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 RNU6-553P-201ENST00000364047 96 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 Y_RNA.333-201ENST00000365274 102 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 RNA5SP151-201ENST00000365632 117 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AL161909.1-201ENST00000397390 712 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 RNU6-628P-201ENST00000410675 107 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC019178.2-201ENST00000423595 505 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 RPL23AP38-201ENST00000423801 469 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 HMGB3P6-201ENST00000444896 598 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 VN1R34P-201ENST00000447387 883 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC009961.3-201ENST00000449832 765 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC097262.1-201ENST00000452559 548 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 CDH12P2-201ENST00000504393 298 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC108475.1-201ENST00000507880 950 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 RN7SKP141-201ENST00000516167 338 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 RNA5SP230-201ENST00000517039 122 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC090695.1-201ENST00000561269 1222 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.56□□□□□ -1.52
SYNE4Q8N205 VN1R90P-201ENST00000595717 726 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AC113403.1-201ENST00000604910 193 ntBASIC5.56□□□□□ -1.52
SYNE4Q8N205 AL392112.1-201ENST00000605115 829 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms