Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC093535.2-201ENST00000624769 2326 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 Y_RNA.169-201ENST00000363745 96 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RNA5SP509-201ENST00000364577 119 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RHOT1P2-201ENST00000366423 333 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RNU6-636P-201ENST00000384598 107 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RNU6-932P-201ENST00000391108 106 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AL034403.1-201ENST00000399414 885 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AL583835.1-201ENST00000399570 407 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC119751.3-201ENST00000399720 670 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RPL37P18-201ENST00000411602 243 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AL590806.1-201ENST00000415818 853 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AL513175.2-201ENST00000422071 443 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC009480.2-201ENST00000422916 432 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RPS12P5-201ENST00000423449 371 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 DNAJC19P7-201ENST00000428811 344 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 VN1R108P-201ENST00000431580 830 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 ELOCP18-201ENST00000434209 337 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 NANOGP2-201ENST00000435391 727 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RPS3AP54-201ENST00000435535 734 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 PTGES3P1-201ENST00000439531 483 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AL589880.1-201ENST00000448271 287 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 USP9YP25-201ENST00000457708 443 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC005410.1-202ENST00000460347 485 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RN7SL738P-201ENST00000470264 297 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC011037.1-201ENST00000483964 558 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 CDH12P2-201ENST00000504393 298 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC118465.1-201ENST00000513820 1271 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC092593.2-201ENST00000513866 913 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RN7SKP141-201ENST00000516167 338 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RNA5SP519-201ENST00000516480 119 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 Y_RNA.688-201ENST00000516565 95 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 CDH12P4-201ENST00000517835 295 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 CDH12P3-201ENST00000517935 295 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 CDH12P1-201ENST00000518435 295 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 LRRC6P1-201ENST00000532188 885 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 MTCO2P15-201ENST00000532655 656 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 TRAV8-5-201ENST00000537369 341 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC011611.5-201ENST00000552477 578 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC068831.4-201ENST00000556118 109 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 PSMB7P1-201ENST00000556349 514 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 TVP23BP1-201ENST00000557500 617 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC023813.2-201ENST00000564321 469 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 SNORD39.2-201ENST00000579995 76 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC091057.2-201ENST00000602594 792 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC064801.1-201ENST00000612025 407 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC090897.3-201ENST00000636973 1157 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 AC073429.2-201ENST00000569694 1444 ntBASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF440Q8IYI8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF440Q8IYI8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ZNF440Q8IYI8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF440Q8IYI8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
ZNF440Q8IYI8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms