Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC011037.1-201ENST00000483964 558 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 RN7SL323P-201ENST00000494712 295 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 CDH12P2-201ENST00000504393 298 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 RAC1P2-201ENST00000511164 579 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 AC005798.1-201ENST00000513715 387 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 IGKV2-23-201ENST00000518729 323 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 CYCSP30-201ENST00000546447 172 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 AC074029.2-201ENST00000551045 634 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 BRDTP1-201ENST00000605735 677 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 AC010857.1-201ENST00000606398 594 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 NCAPGP1-201ENST00000505112 1814 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 FAM91A3P-201ENST00000456826 2544 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.21□□□□□ -1.73
CCDC65Q8IXS2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC65Q8IXS2 AC017002.4-201ENST00000604721 1525 ntBASIC4.21□□□□□ -1.73
CCDC65Q8IXS2 RN7SKP227-201ENST00000364445 330 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 HMGN2P8-201ENST00000391458 268 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 BTF3P9-201ENST00000418784 283 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AL390879.2-203ENST00000426943 1121 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 HIGD1AP12-201ENST00000427832 281 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 SNORA71B-202ENST00000439232 272 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AL353898.1-201ENST00000444055 238 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AP000873.1-201ENST00000463987 400 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 VN1R105P-201ENST00000486595 910 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC010627.1-201ENST00000503819 1294 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC021087.2-201ENST00000504656 1203 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 SNX5P1-201ENST00000505757 1041 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC108471.1-201ENST00000513977 287 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 RNA5SP208-201ENST00000516156 78 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 Vault.1-201ENST00000516474 102 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC092747.2-201ENST00000545069 983 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC020910.2-201ENST00000603635 610 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 FP236240.3-201ENST00000623061 327 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 AC020978.9-201ENST00000624380 1141 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 LINC00561-201ENST00000565815 2738 ntBASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC65Q8IXS2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 IFNNP1-201ENST00000429219 553 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AC091390.1-201ENST00000433904 331 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AC006480.1-201ENST00000449887 378 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 TVP23BP2-201ENST00000455082 615 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 RPL23AP62-201ENST00000463396 453 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AC012170.1-201ENST00000495139 359 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 FABP5P6-201ENST00000510588 409 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 RN7SKP209-201ENST00000516888 304 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 RNU6-352P-201ENST00000516908 107 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 RNA5SP143-201ENST00000516936 115 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 MIR4697-201ENST00000582977 78 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AC115621.1-201ENST00000604653 858 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AP004372.1-201ENST00000604842 844 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 SNORA62.6-201ENST00000606322 83 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms