Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 PRMT5P1-201ENST00000514351 598 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 RNA5SP401-201ENST00000515920 127 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 IGLVIV-64-201ENST00000518581 301 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC023050.3-201ENST00000541142 333 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 RPA2P1-201ENST00000556557 721 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC020661.2-201ENST00000560114 134 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC002310.3-201ENST00000569728 723 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC008507.3-201ENST00000585753 472 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AL353997.4-201ENST00000586196 166 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AL121655.1-201ENST00000605811 308 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC090948.1-201ENST00000607464 549 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 BX323046.1-201ENST00000610145 535 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC093913.1-201ENST00000614178 329 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC073592.6-201ENST00000624271 415 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
UBE3DQ7Z6J8 MFSD8-219ENST00000641228 2559 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AL731532.1-201ENST00000623972 4236 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AF287957.1-201ENST00000607368 1595 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC092447.10-201ENST00000620607 1652 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 SNORD1C-201ENST00000363315 78 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 RNU4-1-201ENST00000363925 141 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 RNU6-921P-201ENST00000384361 107 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 MIR606-201ENST00000384851 96 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC087752.1-201ENST00000391360 558 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC068050.1-201ENST00000394891 380 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AL136116.1-201ENST00000403591 381 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC099535.1-201ENST00000408928 371 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 RPS4XP5-201ENST00000419038 768 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AL592293.2-201ENST00000422292 996 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC092651.1-201ENST00000426110 312 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC119618.1-201ENST00000434191 222 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 IFNA20P-201ENST00000436840 528 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC110602.1-201ENST00000437414 318 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 CFL1P4-201ENST00000451536 498 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AL356010.1-201ENST00000456364 102 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 RPL23AP41-201ENST00000484754 458 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 RN7SL170P-201ENST00000487098 295 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 RN7SKP96-201ENST00000516948 297 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC079905.1-201ENST00000549280 475 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AL352979.3-201ENST00000553515 247 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC012182.1-201ENST00000570133 895 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 MIR7109-201ENST00000613748 65 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC068831.8-201ENST00000620171 435 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC005858.4-201ENST00000623191 700 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AC073593.1-201ENST00000624500 411 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 AP001052.1-201ENST00000626421 99 ntBASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
UBE3DQ7Z6J8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms