Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC027644.1-201ENST00000419595 298 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 DDX39BP1-205ENST00000422507 192 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AL353748.1-201ENST00000440753 474 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 PTENP1-201ENST00000447117 1215 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AL589880.1-201ENST00000448271 287 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC233982.1-201ENST00000451247 436 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AP000926.1-201ENST00000479573 241 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 RPS3AP6-201ENST00000484430 795 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 RPS27P23-201ENST00000487608 251 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC012170.1-201ENST00000495139 359 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC140172.1-201ENST00000502928 141 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC008494.2-201ENST00000514544 370 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 RNA5SP464-201ENST00000516251 108 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC026407.1-201ENST00000518369 204 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 EEF1A1P37-201ENST00000522748 715 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 OR7E128P-201ENST00000532736 1024 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC133555.2-201ENST00000550213 292 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 BPTFP1-201ENST00000579209 492 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC091488.1-201ENST00000604239 660 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AL390816.3-201ENST00000604527 1066 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 MIR6716-201ENST00000613413 80 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 AC079395.3-201ENST00000615161 484 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 MAPK10-286ENST00000641208 8747 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 ECM1P2-201ENST00000503354 1577 ntBASIC3.97□□□□□ -1.77
PDLIM3Q53GG5 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PDLIM3Q53GG5 AL049737.1-201ENST00000413920 1403 ntBASIC3.96□□□□□ -1.77
PDLIM3Q53GG5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 HNRNPDP2-201ENST00000406475 478 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AL603766.1-201ENST00000407763 664 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 RN7SKP177-201ENST00000410567 355 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC008280.1-201ENST00000418851 412 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 OR5AW1P-201ENST00000426334 1006 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 RPL37P1-201ENST00000432310 284 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 OR7E125P-201ENST00000443450 846 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC112498.1-201ENST00000444401 332 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 MRPL42P4-201ENST00000453267 443 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC133473.1-201ENST00000455173 299 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC022795.1-201ENST00000473808 480 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AP002812.1-201ENST00000495378 474 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC091951.3-201ENST00000504093 246 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC118282.2-201ENST00000508739 374 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 TCP11X3P-202ENST00000514289 1254 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 RN7SKP260-201ENST00000516907 149 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 MTND3P12-201ENST00000559068 328 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC053481.3-201ENST00000577881 843 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 MIR4691-201ENST00000583764 85 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 VN1R83P-201ENST00000595685 445 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC068790.7-201ENST00000602347 528 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC067959.1-201ENST00000604334 379 ntBASIC3.96□□□□□ -1.78
PDLIM3Q53GG5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms