Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 SDAD1P2-201ENST00000441308 2028 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 Y_RNA.14-201ENST00000362415 103 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 Y_RNA.210-201ENST00000364161 110 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 RNU6-619P-201ENST00000365146 108 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 RNU6-108P-201ENST00000365558 107 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 RNU6-890P-201ENST00000384121 107 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 MT-TW-201ENST00000387382 68 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 MIR541-201ENST00000401360 84 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 SNORA11C-201ENST00000408532 129 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 RNU6-193P-201ENST00000410977 107 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 COX6CP15-201ENST00000426313 211 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 GPR143P-201ENST00000434155 205 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 SLC25A18P1-201ENST00000449385 454 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 MTND4LP30-201ENST00000454092 297 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 VPS25P1-201ENST00000455691 508 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 RNU7-66P-201ENST00000459469 62 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 RNA5SP92-201ENST00000516437 110 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 RNU6-566P-201ENST00000516790 107 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AC012400.1-201ENST00000518452 381 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AP001029.3-201ENST00000588063 596 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 EIF3FP1-201ENST00000613970 806 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AC127024.6-201ENST00000621598 424 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AC010149.2-201ENST00000637608 315 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 OR11H5P-202ENST00000641612 1325 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AC034229.2-201ENST00000566945 2508 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 AL136531.3-201ENST00000624378 3658 ntBASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTC1Q2NKJ3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 AC245100.2-201ENST00000454544 1679 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RNA5SP333-201ENST00000363466 118 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RNU6-522P-201ENST00000364497 107 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RNA5SP334-201ENST00000364825 118 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RNU6-169P-201ENST00000365336 107 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RHOT1P2-201ENST00000366423 333 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 Y_RNA.462-201ENST00000384268 102 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 Y_RNA.493-201ENST00000384422 102 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 Y_RNA.530-201ENST00000384587 101 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 TMSB4XP8-201ENST00000402089 135 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 TMSB4XP6-201ENST00000415187 135 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 TMSB4XP1-201ENST00000424567 135 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RPL21P2-201ENST00000440049 481 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RPS4XP18-201ENST00000495480 763 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RPSAP51-201ENST00000497462 645 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RPS27P27-201ENST00000498779 255 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 SNX18P24-201ENST00000505249 671 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 SNORD46.2-201ENST00000516021 102 ntBASIC6.88□□□□□ -1.31
CTC1Q2NKJ3 RNA5SP206-201ENST00000516703 121 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms