Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 HSPE1P16-201ENST00000426640 348 ntBASIC5.72□□□□□ -1.49
TOP2BQ02880 ATP5C1P1-201ENST00000441945 895 ntBASIC5.72□□□□□ -1.49
TOP2BQ02880 NANOGNBP1-201ENST00000448444 480 ntBASIC5.72□□□□□ -1.49
TOP2BQ02880 AC005798.1-201ENST00000513715 387 ntBASIC5.72□□□□□ -1.49
TOP2BQ02880 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TOP2BQ02880 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.72□□□□□ -1.49
TOP2BQ02880 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOP2BQ02880 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOP2BQ02880 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TOP2BQ02880 AC119744.1-201ENST00000454746 1715 ntBASIC5.71□□□□□ -1.49
TOP2BQ02880 AL136131.1-201ENST00000406079 803 ntBASIC5.71□□□□□ -1.5
TOP2BQ02880 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.71□□□□□ -1.5
TOP2BQ02880 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.71□□□□□ -1.5
TOP2BQ02880 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP2BQ02880 IFNNP1-201ENST00000429219 553 ntBASIC5.71□□□□□ -1.5
TOP2BQ02880 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.71□□□□□ -1.5
TOP2BQ02880 AP001992.1-205ENST00000462248 379 ntBASIC5.71□□□□□ -1.5
TOP2BQ02880 HMGB3P14-201ENST00000494195 599 ntBASIC5.71□□□□□ -1.5
TOP2BQ02880 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TOP2BQ02880 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.71□□□□□ -1.5
TOP2BQ02880 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.71□□□□□ -1.5
TOP2BQ02880 AC015802.5-201ENST00000607478 399 ntBASIC5.71□□□□□ -1.5
TOP2BQ02880 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP2BQ02880 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TOP2BQ02880 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC5.71□□□□□ -1.5
TOP2BQ02880 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TOP2BQ02880 AC139713.2-215ENST00000641428 5037 ntBASIC5.71□□□□□ -1.5
TOP2BQ02880 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TOP2BQ02880 COTL1P1-201ENST00000422309 375 ntBASIC5.7□□□□□ -1.5
TOP2BQ02880 AF228730.2-201ENST00000438784 848 ntBASIC5.7□□□□□ -1.5
TOP2BQ02880 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.7□□□□□ -1.5
TOP2BQ02880 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP2BQ02880 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.7□□□□□ -1.5
TOP2BQ02880 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.7□□□□□ -1.5
TOP2BQ02880 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.7□□□□□ -1.5
TOP2BQ02880 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TOP2BQ02880 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.7□□□□□ -1.5
TOP2BQ02880 FAM35BP-202ENST00000497389 3337 ntBASIC5.7□□□□□ -1.5
TOP2BQ02880 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP2BQ02880 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.7□□□□□ -1.5
TOP2BQ02880 RNU1-70P-201ENST00000362618 164 ntBASIC5.7□□□□□ -1.5
TOP2BQ02880 RNU1-18P-201ENST00000363062 164 ntBASIC5.7□□□□□ -1.5
TOP2BQ02880 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.7□□□□□ -1.5
TOP2BQ02880 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP2BQ02880 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.7□□□□□ -1.5
TOP2BQ02880 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.7□□□□□ -1.5
TOP2BQ02880 AC110794.1-201ENST00000505816 425 ntBASIC5.7□□□□□ -1.5
TOP2BQ02880 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP2BQ02880 AC104763.2-201ENST00000604179 382 ntBASIC5.7□□□□□ -1.5
TOP2BQ02880 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TOP2BQ02880 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TOP2BQ02880 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP2BQ02880 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
TOP2BQ02880 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP2BQ02880 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP2BQ02880 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP2BQ02880 OTUD4P1-201ENST00000237841 3067 ntBASIC5.69□□□□□ -1.5
TOP2BQ02880 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.69□□□□□ -1.5
TOP2BQ02880 RPL27AP5-201ENST00000469428 449 ntBASIC5.69□□□□□ -1.5
TOP2BQ02880 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.69□□□□□ -1.5
TOP2BQ02880 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TOP2BQ02880 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP2BQ02880 AC138932.5-201ENST00000617759 563 ntBASIC5.69□□□□□ -1.5
TOP2BQ02880 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP2BQ02880 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP2BQ02880 HSPA8P19-201ENST00000505359 1517 ntBASIC5.69□□□□□ -1.5
TOP2BQ02880 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.69□□□□□ -1.5
TOP2BQ02880 AC068254.2-201ENST00000623938 3577 ntBASIC5.69□□□□□ -1.5
TOP2BQ02880 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP2BQ02880 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP2BQ02880 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TOP2BQ02880 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TOP2BQ02880 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TOP2BQ02880 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP2BQ02880 SNORA80A-201ENST00000363922 136 ntBASIC5.68□□□□□ -1.5
TOP2BQ02880 RNU6-283P-201ENST00000364788 107 ntBASIC5.68□□□□□ -1.5
TOP2BQ02880 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP2BQ02880 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TOP2BQ02880 RNA5SP341-201ENST00000516261 117 ntBASIC5.68□□□□□ -1.5
TOP2BQ02880 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.68□□□□□ -1.5
TOP2BQ02880 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.68□□□□□ -1.5
TOP2BQ02880 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.68□□□□□ -1.5
TOP2BQ02880 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.68□□□□□ -1.5
TOP2BQ02880 MIR486-1-201ENST00000612171 68 ntBASIC5.68□□□□□ -1.5
TOP2BQ02880 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TOP2BQ02880 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.68□□□□□ -1.5
TOP2BQ02880 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.68□□□□□ -1.5
TOP2BQ02880 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.68□□□□□ -1.5
TOP2BQ02880 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TOP2BQ02880 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TOP2BQ02880 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOP2BQ02880 SNORA54-201ENST00000384281 123 ntBASIC5.67□□□□□ -1.5
TOP2BQ02880 MTND4P22-201ENST00000413116 1169 ntBASIC5.67□□□□□ -1.5
TOP2BQ02880 Z99755.1-201ENST00000414048 380 ntBASIC5.67□□□□□ -1.5
TOP2BQ02880 OR2X1P-201ENST00000421144 687 ntBASIC5.67□□□□□ -1.5
TOP2BQ02880 AC074367.1-201ENST00000438685 1125 ntBASIC5.67□□□□□ -1.5
TOP2BQ02880 CCRL1P1-201ENST00000449542 1053 ntBASIC5.67□□□□□ -1.5
TOP2BQ02880 S100A11P2-201ENST00000467589 312 ntBASIC5.67□□□□□ -1.5
TOP2BQ02880 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.67□□□□□ -1.5
TOP2BQ02880 DUXAP6-201ENST00000553858 601 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms