Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLTCL1P53675 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.88□□□□□ -1.63
CLTCL1P53675 TNPO1P3-201ENST00000436471 2662 ntBASIC4.88□□□□□ -1.63
CLTCL1P53675 MTCO1P46-201ENST00000451639 1491 ntBASIC4.88□□□□□ -1.63
CLTCL1P53675 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLTCL1P53675 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.87□□□□□ -1.63
CLTCL1P53675 GNG5P1-201ENST00000255500 204 ntBASIC4.87□□□□□ -1.63
CLTCL1P53675 RPL23AP57-201ENST00000332361 466 ntBASIC4.87□□□□□ -1.63
CLTCL1P53675 AL136131.1-201ENST00000406079 803 ntBASIC4.87□□□□□ -1.63
CLTCL1P53675 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.87□□□□□ -1.63
CLTCL1P53675 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.87□□□□□ -1.63
CLTCL1P53675 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.87□□□□□ -1.63
CLTCL1P53675 AJ239321.1-201ENST00000424255 564 ntBASIC4.87□□□□□ -1.63
CLTCL1P53675 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.87□□□□□ -1.63
CLTCL1P53675 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLTCL1P53675 AC026333.2-201ENST00000542164 106 ntBASIC4.87□□□□□ -1.63
CLTCL1P53675 AL033523.1-201ENST00000605153 153 ntBASIC4.87□□□□□ -1.63
CLTCL1P53675 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.87□□□□□ -1.63
CLTCL1P53675 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLTCL1P53675 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CLTCL1P53675 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.87□□□□□ -1.63
CLTCL1P53675 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.87□□□□□ -1.63
CLTCL1P53675 AL356489.2-201ENST00000566968 3528 ntBASIC4.87□□□□□ -1.63
CLTCL1P53675 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CLTCL1P53675 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLTCL1P53675 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CLTCL1P53675 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLTCL1P53675 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLTCL1P53675 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.86□□□□□ -1.63
CLTCL1P53675 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.86□□□□□ -1.63
CLTCL1P53675 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.86□□□□□ -1.63
CLTCL1P53675 RPL23AP82-202ENST00000427528 469 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 ATP5C1P1-201ENST00000441945 895 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.86□□□□□ -1.63
CLTCL1P53675 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.86□□□□□ -1.63
CLTCL1P53675 CENPBD1P1-201ENST00000464061 469 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 AC018442.3-201ENST00000523025 183 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.86□□□□□ -1.63
CLTCL1P53675 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.86□□□□□ -1.63
CLTCL1P53675 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.86□□□□□ -1.63
CLTCL1P53675 HMGB1P50-201ENST00000605814 607 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.86□□□□□ -1.63
CLTCL1P53675 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.86□□□□□ -1.63
CLTCL1P53675 Z83843.1-201ENST00000604070 3685 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLTCL1P53675 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLTCL1P53675 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CLTCL1P53675 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLTCL1P53675 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLTCL1P53675 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.86□□□□□ -1.63
CLTCL1P53675 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
CLTCL1P53675 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLTCL1P53675 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLTCL1P53675 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLTCL1P53675 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.86□□□□□ -1.63
CLTCL1P53675 AL353705.1-201ENST00000433468 480 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 AL136126.1-201ENST00000473603 402 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 AC080014.1-201ENST00000496877 1201 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.86□□□□□ -1.63
CLTCL1P53675 SNORD39.4-201ENST00000620099 78 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 CR392039.4-201ENST00000624968 501 ntBASIC4.86□□□□□ -1.63
CLTCL1P53675 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CLTCL1P53675 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLTCL1P53675 AC068647.1-201ENST00000489539 2265 ntBASIC4.85□□□□□ -1.63
CLTCL1P53675 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLTCL1P53675 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CLTCL1P53675 SNORA38.1-201ENST00000364172 131 ntBASIC4.85□□□□□ -1.63
CLTCL1P53675 SNORA54-201ENST00000384281 123 ntBASIC4.85□□□□□ -1.63
CLTCL1P53675 U3.19-201ENST00000390893 196 ntBASIC4.85□□□□□ -1.63
CLTCL1P53675 ZNF603P-201ENST00000405613 487 ntBASIC4.85□□□□□ -1.63
CLTCL1P53675 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.85□□□□□ -1.63
CLTCL1P53675 MRPS18BP2-201ENST00000434310 759 ntBASIC4.85□□□□□ -1.63
CLTCL1P53675 AC005229.2-201ENST00000456995 399 ntBASIC4.85□□□□□ -1.63
CLTCL1P53675 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.85□□□□□ -1.63
CLTCL1P53675 AC021678.1-201ENST00000505195 936 ntBASIC4.85□□□□□ -1.63
CLTCL1P53675 AC113430.1-201ENST00000506872 718 ntBASIC4.85□□□□□ -1.63
CLTCL1P53675 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.85□□□□□ -1.63
CLTCL1P53675 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.85□□□□□ -1.63
CLTCL1P53675 AP000926.4-201ENST00000527351 454 ntBASIC4.85□□□□□ -1.63
CLTCL1P53675 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.85□□□□□ -1.63
CLTCL1P53675 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.85□□□□□ -1.63
CLTCL1P53675 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.85□□□□□ -1.63
CLTCL1P53675 AC006539.2-201ENST00000601729 572 ntBASIC4.85□□□□□ -1.63
CLTCL1P53675 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.85□□□□□ -1.63
CLTCL1P53675 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.85□□□□□ -1.63
CLTCL1P53675 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLTCL1P53675 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLTCL1P53675 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLTCL1P53675 LAP3P1-201ENST00000403648 294 ntBASIC4.84□□□□□ -1.63
CLTCL1P53675 AC002075.2-201ENST00000425207 252 ntBASIC4.84□□□□□ -1.63
CLTCL1P53675 AC099560.2-201ENST00000457554 255 ntBASIC4.84□□□□□ -1.63
CLTCL1P53675 AC097462.2-201ENST00000504623 481 ntBASIC4.84□□□□□ -1.63
CLTCL1P53675 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.84□□□□□ -1.63
CLTCL1P53675 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.84□□□□□ -1.63
CLTCL1P53675 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLTCL1P53675 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CLTCL1P53675 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.84□□□□□ -1.63
CLTCL1P53675 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLTCL1P53675 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms