Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC092868.3-201ENST00000560515 784 ntBASIC4.2□□□□□ -1.74
NUP98P52948 AP005262.1-201ENST00000582646 997 ntBASIC4.2□□□□□ -1.74
NUP98P52948 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.2□□□□□ -1.74
NUP98P52948 AC006539.2-201ENST00000601729 572 ntBASIC4.2□□□□□ -1.74
NUP98P52948 RNVU1-4-201ENST00000612985 164 ntBASIC4.2□□□□□ -1.74
NUP98P52948 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP98P52948 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP98P52948 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
NUP98P52948 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP98P52948 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.19□□□□□ -1.74
NUP98P52948 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.19□□□□□ -1.74
NUP98P52948 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.19□□□□□ -1.74
NUP98P52948 RNA5SP39-201ENST00000411245 120 ntBASIC4.19□□□□□ -1.74
NUP98P52948 MTCO1P45-201ENST00000431457 267 ntBASIC4.19□□□□□ -1.74
NUP98P52948 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.19□□□□□ -1.74
NUP98P52948 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.19□□□□□ -1.74
NUP98P52948 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.19□□□□□ -1.74
NUP98P52948 BNIP3P38-201ENST00000601117 544 ntBASIC4.19□□□□□ -1.74
NUP98P52948 AC124312.4-201ENST00000605533 310 ntBASIC4.19□□□□□ -1.74
NUP98P52948 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.19□□□□□ -1.74
NUP98P52948 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NUP98P52948 MTCO1P46-201ENST00000451639 1491 ntBASIC4.19□□□□□ -1.74
NUP98P52948 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUP98P52948 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUP98P52948 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUP98P52948 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.19□□□□□ -1.74
NUP98P52948 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUP98P52948 AL353705.1-201ENST00000433468 480 ntBASIC4.18□□□□□ -1.74
NUP98P52948 AC006994.1-201ENST00000438212 839 ntBASIC4.18□□□□□ -1.74
NUP98P52948 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.18□□□□□ -1.74
NUP98P52948 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.18□□□□□ -1.74
NUP98P52948 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NUP98P52948 AL079305.1-201ENST00000623159 3008 ntBASIC4.18□□□□□ -1.74
NUP98P52948 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.18□□□□□ -1.74
NUP98P52948 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
NUP98P52948 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NUP98P52948 AC006504.1-201ENST00000562493 3666 ntBASIC4.18□□□□□ -1.74
NUP98P52948 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUP98P52948 OR10J6P-201ENST00000289731 930 ntBASIC4.18□□□□□ -1.74
NUP98P52948 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NUP98P52948 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.18□□□□□ -1.74
NUP98P52948 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.18□□□□□ -1.74
NUP98P52948 GSTA8P-201ENST00000404253 637 ntBASIC4.18□□□□□ -1.74
NUP98P52948 AL160275.2-201ENST00000412010 394 ntBASIC4.18□□□□□ -1.74
NUP98P52948 MTND2P11-201ENST00000423638 648 ntBASIC4.18□□□□□ -1.74
NUP98P52948 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.18□□□□□ -1.74
NUP98P52948 RPS26P47-201ENST00000427219 348 ntBASIC4.18□□□□□ -1.74
NUP98P52948 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.18□□□□□ -1.74
NUP98P52948 RPS26P3-201ENST00000470205 348 ntBASIC4.18□□□□□ -1.74
NUP98P52948 RPL5P16-201ENST00000471467 790 ntBASIC4.18□□□□□ -1.74
NUP98P52948 AC004057.1-201ENST00000485827 348 ntBASIC4.18□□□□□ -1.74
NUP98P52948 AC090136.1-201ENST00000520009 240 ntBASIC4.18□□□□□ -1.74
NUP98P52948 AL513477.2-201ENST00000607858 568 ntBASIC4.18□□□□□ -1.74
NUP98P52948 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.18□□□□□ -1.74
NUP98P52948 AC018692.3-201ENST00000623929 123 ntBASIC4.18□□□□□ -1.74
NUP98P52948 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.18□□□□□ -1.74
NUP98P52948 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NUP98P52948 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
NUP98P52948 AL513302.2-201ENST00000562313 1842 ntBASIC4.17□□□□□ -1.74
NUP98P52948 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
NUP98P52948 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUP98P52948 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NUP98P52948 HMGN2P8-201ENST00000391458 268 ntBASIC4.17□□□□□ -1.74
NUP98P52948 SNORA11C-201ENST00000408532 129 ntBASIC4.17□□□□□ -1.74
NUP98P52948 AP001486.1-201ENST00000463339 476 ntBASIC4.17□□□□□ -1.74
NUP98P52948 AC080014.1-201ENST00000496877 1201 ntBASIC4.17□□□□□ -1.74
NUP98P52948 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.17□□□□□ -1.74
NUP98P52948 OR4R3P-201ENST00000525084 838 ntBASIC4.17□□□□□ -1.74
NUP98P52948 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.17□□□□□ -1.74
NUP98P52948 AL162274.2-201ENST00000614406 332 ntBASIC4.17□□□□□ -1.74
NUP98P52948 ATP5A1P2-202ENST00000616464 443 ntBASIC4.17□□□□□ -1.74
NUP98P52948 AC241377.1-201ENST00000619797 406 ntBASIC4.17□□□□□ -1.74
NUP98P52948 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.17□□□□□ -1.74
NUP98P52948 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUP98P52948 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
NUP98P52948 AL022311.1-201ENST00000623726 19416 ntBASIC4.17□□□□□ -1.74
NUP98P52948 AC093849.1-201ENST00000563631 2209 ntBASIC4.17□□□□□ -1.74
NUP98P52948 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUP98P52948 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NUP98P52948 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUP98P52948 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP98P52948 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUP98P52948 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP98P52948 TAF9BP1-201ENST00000396646 746 ntBASIC4.16□□□□□ -1.74
NUP98P52948 AL136116.1-201ENST00000403591 381 ntBASIC4.16□□□□□ -1.74
NUP98P52948 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.16□□□□□ -1.74
NUP98P52948 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP98P52948 RN7SKP289-201ENST00000517244 295 ntBASIC4.16□□□□□ -1.74
NUP98P52948 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP98P52948 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUP98P52948 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP98P52948 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.16□□□□□ -1.74
NUP98P52948 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUP98P52948 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUP98P52948 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP98P52948 GNG5P5-201ENST00000420444 220 ntBASIC4.16□□□□□ -1.74
NUP98P52948 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP98P52948 AC025750.2-201ENST00000442609 450 ntBASIC4.16□□□□□ -1.74
NUP98P52948 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.16□□□□□ -1.74
NUP98P52948 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms