Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NEK3P51956 SNORA77-201ENST00000408716 125 ntBASIC5.06□□□□□ -1.6
NEK3P51956 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.06□□□□□ -1.6
NEK3P51956 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.06□□□□□ -1.6
NEK3P51956 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.06□□□□□ -1.6
NEK3P51956 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.06□□□□□ -1.6
NEK3P51956 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.06□□□□□ -1.6
NEK3P51956 OR51AB1P-201ENST00000429046 620 ntBASIC5.06□□□□□ -1.6
NEK3P51956 MTND4P6-201ENST00000438297 472 ntBASIC5.06□□□□□ -1.6
NEK3P51956 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.06□□□□□ -1.6
NEK3P51956 AC004980.3-201ENST00000447046 365 ntBASIC5.06□□□□□ -1.6
NEK3P51956 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.06□□□□□ -1.6
NEK3P51956 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.06□□□□□ -1.6
NEK3P51956 MTND2P19-201ENST00000449129 1012 ntBASIC5.06□□□□□ -1.6
NEK3P51956 TCEA1P1-201ENST00000449716 880 ntBASIC5.06□□□□□ -1.6
NEK3P51956 RPL12P26-201ENST00000452430 487 ntBASIC5.06□□□□□ -1.6
NEK3P51956 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 RPL7P16-201ENST00000479738 738 ntBASIC5.06□□□□□ -1.6
NEK3P51956 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.06□□□□□ -1.6
NEK3P51956 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.06□□□□□ -1.6
NEK3P51956 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.06□□□□□ -1.6
NEK3P51956 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.06□□□□□ -1.6
NEK3P51956 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.06□□□□□ -1.6
NEK3P51956 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.06□□□□□ -1.6
NEK3P51956 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.06□□□□□ -1.6
NEK3P51956 AC009094.1-201ENST00000564443 426 ntBASIC5.06□□□□□ -1.6
NEK3P51956 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.06□□□□□ -1.6
NEK3P51956 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 AL009028.1-201ENST00000604895 802 ntBASIC5.06□□□□□ -1.6
NEK3P51956 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.06□□□□□ -1.6
NEK3P51956 RNA5SP108-201ENST00000605921 117 ntBASIC5.06□□□□□ -1.6
NEK3P51956 FAM25E-202ENST00000608562 189 ntBASIC5.06□□□□□ -1.6
NEK3P51956 AC100827.5-201ENST00000615883 426 ntBASIC5.06□□□□□ -1.6
NEK3P51956 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 AC087385.3-201ENST00000620477 187 ntBASIC5.06□□□□□ -1.6
NEK3P51956 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.06□□□□□ -1.6
NEK3P51956 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEK3P51956 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEK3P51956 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEK3P51956 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEK3P51956 SALL4P2-201ENST00000423288 2910 ntBASIC5.06□□□□□ -1.6
NEK3P51956 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
NEK3P51956 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEK3P51956 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEK3P51956 FAM91A3P-201ENST00000456826 2544 ntBASIC5.05□□□□□ -1.6
NEK3P51956 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.05□□□□□ -1.6
NEK3P51956 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
NEK3P51956 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
NEK3P51956 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NEK3P51956 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.05□□□□□ -1.6
NEK3P51956 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEK3P51956 OR10J6P-201ENST00000289731 930 ntBASIC5.05□□□□□ -1.6
NEK3P51956 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NEK3P51956 SNRPEP3-201ENST00000338402 276 ntBASIC5.05□□□□□ -1.6
NEK3P51956 RN7SKP149-201ENST00000363008 344 ntBASIC5.05□□□□□ -1.6
NEK3P51956 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NEK3P51956 AL049545.1-201ENST00000401856 572 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AL450338.1-201ENST00000407987 512 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 NIPA2P1-201ENST00000426223 976 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.05□□□□□ -1.6
NEK3P51956 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 AC112498.1-201ENST00000444401 332 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 AC009963.2-201ENST00000453431 138 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AL445433.1-201ENST00000457507 257 ntBASIC5.05□□□□□ -1.6
NEK3P51956 RPS17P2-201ENST00000461663 408 ntBASIC5.05□□□□□ -1.6
NEK3P51956 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.05□□□□□ -1.6
NEK3P51956 AC020890.1-201ENST00000491837 504 ntBASIC5.05□□□□□ -1.6
NEK3P51956 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.05□□□□□ -1.6
NEK3P51956 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.05□□□□□ -1.6
NEK3P51956 MTATP6P15-201ENST00000527233 835 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AP003461.1-201ENST00000528866 78 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AC021006.3-201ENST00000530771 192 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 CYCSP40-201ENST00000575927 294 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.05□□□□□ -1.6
NEK3P51956 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.05□□□□□ -1.6
NEK3P51956 ELOCP35-201ENST00000604289 336 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AC104687.2-201ENST00000604442 342 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AC087783.2-201ENST00000605070 562 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AL158042.1-201ENST00000605338 460 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 AC092650.2-201ENST00000619984 902 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AC091953.3-201ENST00000623220 236 ntBASIC5.05□□□□□ -1.6
NEK3P51956 AC079416.3-201ENST00000624479 549 ntBASIC5.05□□□□□ -1.6
NEK3P51956 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NEK3P51956 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms