Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 VN1R48P-201ENST00000448149 1036 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.61□□□□□ -1.83
BRCA2P51587 IGHVIII-44-202ENST00000636235 289 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BRCA2P51587 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BRCA2P51587 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
BRCA2P51587 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
BRCA2P51587 ARL4AP3-201ENST00000441452 574 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.61□□□□□ -1.83
BRCA2P51587 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.61□□□□□ -1.83
BRCA2P51587 DPPA3P2-201ENST00000553589 478 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 AC006557.5-201ENST00000603126 811 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
BRCA2P51587 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BRCA2P51587 AC010401.2-201ENST00000575137 4934 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BRCA2P51587 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BRCA2P51587 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.6□□□□□ -1.83
BRCA2P51587 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BRCA2P51587 MTCO1P9-201ENST00000505577 1534 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
BRCA2P51587 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
BRCA2P51587 MIR887-201ENST00000401258 79 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 AC019097.1-201ENST00000424783 735 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.6□□□□□ -1.83
BRCA2P51587 RN7SL594P-201ENST00000470590 287 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.6□□□□□ -1.83
BRCA2P51587 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.6□□□□□ -1.83
BRCA2P51587 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.6□□□□□ -1.83
BRCA2P51587 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.6□□□□□ -1.83
BRCA2P51587 Y_RNA.226-201ENST00000364337 114 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.6□□□□□ -1.83
BRCA2P51587 ISCA1P6-201ENST00000427740 390 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.6□□□□□ -1.83
BRCA2P51587 AC019227.1-201ENST00000526902 510 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.6□□□□□ -1.83
BRCA2P51587 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.6□□□□□ -1.83
BRCA2P51587 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BRCA2P51587 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BRCA2P51587 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BRCA2P51587 HCFC2P1-201ENST00000392864 1592 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
BRCA2P51587 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.6□□□□□ -1.83
BRCA2P51587 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.6□□□□□ -1.83
BRCA2P51587 SNORA18.3-201ENST00000384122 132 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
BRCA2P51587 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.6□□□□□ -1.83
BRCA2P51587 RPS29P21-201ENST00000496272 170 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.6□□□□□ -1.83
BRCA2P51587 AC087888.1-201ENST00000550884 1254 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 CYP4A43P-201ENST00000568156 121 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.6□□□□□ -1.83
BRCA2P51587 AC020914.4-201ENST00000597690 277 ntBASIC3.6□□□□□ -1.83
BRCA2P51587 AC139713.2-215ENST00000641428 5037 ntBASIC3.59□□□□□ -1.83
BRCA2P51587 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.59□□□□□ -1.83
BRCA2P51587 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BRCA2P51587 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BRCA2P51587 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BRCA2P51587 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.59□□□□□ -1.83
BRCA2P51587 LSM3P2-201ENST00000551246 273 ntBASIC3.59□□□□□ -1.83
BRCA2P51587 AC026979.4-201ENST00000606555 645 ntBASIC3.59□□□□□ -1.83
BRCA2P51587 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BRCA2P51587 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC3.59□□□□□ -1.83
BRCA2P51587 AC090971.4-201ENST00000560291 1800 ntBASIC3.59□□□□□ -1.83
BRCA2P51587 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC3.59□□□□□ -1.83
BRCA2P51587 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.59□□□□□ -1.83
BRCA2P51587 AC117440.1-201ENST00000474107 571 ntBASIC3.59□□□□□ -1.83
BRCA2P51587 SNRPCP3-201ENST00000474888 476 ntBASIC3.59□□□□□ -1.83
BRCA2P51587 UBL5P3-201ENST00000475112 231 ntBASIC3.59□□□□□ -1.83
BRCA2P51587 AL592295.2-201ENST00000612578 206 ntBASIC3.59□□□□□ -1.83
BRCA2P51587 AL590808.1-201ENST00000618696 141 ntBASIC3.59□□□□□ -1.83
BRCA2P51587 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
BRCA2P51587 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC3.59□□□□□ -1.84
BRCA2P51587 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
BRCA2P51587 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.84
BRCA2P51587 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
BRCA2P51587 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
BRCA2P51587 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
BRCA2P51587 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.59□□□□□ -1.84
BRCA2P51587 TOMM20P4-201ENST00000427861 435 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 AC096638.2-201ENST00000434965 711 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.58□□□□□ -1.84
BRCA2P51587 RN7SL20P-201ENST00000488827 297 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.58□□□□□ -1.84
BRCA2P51587 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.58□□□□□ -1.84
BRCA2P51587 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.58□□□□□ -1.84
BRCA2P51587 AC234778.2-201ENST00000566241 354 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
BRCA2P51587 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BRCA2P51587 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
BRCA2P51587 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.58□□□□□ -1.84
BRCA2P51587 AC073069.1-201ENST00000428657 441 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.58□□□□□ -1.84
BRCA2P51587 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.58□□□□□ -1.84
BRCA2P51587 AL139174.1-201ENST00000531489 886 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 HMGB1P6-201ENST00000569046 646 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 MIR4472-2-201ENST00000582069 67 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.58□□□□□ -1.84
BRCA2P51587 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.58□□□□□ -1.84
BRCA2P51587 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms