Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 DDX6P1-205ENST00000441966 1436 ntBASIC4.11□□□□□ -1.75
CASP4P49662 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CASP4P49662 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CASP4P49662 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CASP4P49662 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CASP4P49662 NCAPGP1-201ENST00000505112 1814 ntBASIC4.1□□□□□ -1.75
CASP4P49662 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CASP4P49662 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CASP4P49662 RNA5SP322-201ENST00000363617 119 ntBASIC4.1□□□□□ -1.75
CASP4P49662 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CASP4P49662 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.1□□□□□ -1.75
CASP4P49662 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CASP4P49662 RNU6-452P-201ENST00000384406 107 ntBASIC4.1□□□□□ -1.75
CASP4P49662 MIR3074-201ENST00000384885 81 ntBASIC4.1□□□□□ -1.75
CASP4P49662 RPL7P60-201ENST00000397636 735 ntBASIC4.1□□□□□ -1.75
CASP4P49662 ZNF603P-201ENST00000405613 487 ntBASIC4.1□□□□□ -1.75
CASP4P49662 Z86062.1-201ENST00000406773 777 ntBASIC4.1□□□□□ -1.75
CASP4P49662 HSPE1P8-201ENST00000406997 288 ntBASIC4.1□□□□□ -1.75
CASP4P49662 TCEA1P4-201ENST00000415066 844 ntBASIC4.1□□□□□ -1.75
CASP4P49662 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.1□□□□□ -1.75
CASP4P49662 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.1□□□□□ -1.75
CASP4P49662 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.1□□□□□ -1.75
CASP4P49662 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.1□□□□□ -1.75
CASP4P49662 AL031663.1-201ENST00000437445 219 ntBASIC4.1□□□□□ -1.75
CASP4P49662 RPL21P133-201ENST00000443666 476 ntBASIC4.1□□□□□ -1.75
CASP4P49662 RPL7P31-201ENST00000450192 724 ntBASIC4.1□□□□□ -1.75
CASP4P49662 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.1□□□□□ -1.75
CASP4P49662 HMGB3P14-201ENST00000494195 599 ntBASIC4.1□□□□□ -1.75
CASP4P49662 AL139099.1-201ENST00000497398 403 ntBASIC4.1□□□□□ -1.75
CASP4P49662 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.1□□□□□ -1.75
CASP4P49662 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.1□□□□□ -1.75
CASP4P49662 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.1□□□□□ -1.75
CASP4P49662 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.1□□□□□ -1.75
CASP4P49662 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.1□□□□□ -1.75
CASP4P49662 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.1□□□□□ -1.75
CASP4P49662 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.1□□□□□ -1.75
CASP4P49662 AC008011.1-201ENST00000545989 227 ntBASIC4.1□□□□□ -1.75
CASP4P49662 CYCSP30-201ENST00000546447 172 ntBASIC4.1□□□□□ -1.75
CASP4P49662 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.1□□□□□ -1.75
CASP4P49662 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.1□□□□□ -1.75
CASP4P49662 AC106785.1-201ENST00000565935 262 ntBASIC4.1□□□□□ -1.75
CASP4P49662 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.1□□□□□ -1.75
CASP4P49662 AC055764.2-201ENST00000610089 670 ntBASIC4.1□□□□□ -1.75
CASP4P49662 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.1□□□□□ -1.75
CASP4P49662 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CASP4P49662 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CASP4P49662 AC116563.2-201ENST00000624751 535 ntBASIC4.1□□□□□ -1.75
CASP4P49662 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.1□□□□□ -1.75
CASP4P49662 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.1□□□□□ -1.75
CASP4P49662 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CASP4P49662 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CASP4P49662 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CASP4P49662 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.1□□□□□ -1.75
CASP4P49662 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.09□□□□□ -1.75
CASP4P49662 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CASP4P49662 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CASP4P49662 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CASP4P49662 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.09□□□□□ -1.75
CASP4P49662 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CASP4P49662 ZNF602P-201ENST00000405929 924 ntBASIC4.09□□□□□ -1.75
CASP4P49662 RNU4-74P-201ENST00000411280 161 ntBASIC4.09□□□□□ -1.75
CASP4P49662 RAC1P3-201ENST00000416129 580 ntBASIC4.09□□□□□ -1.75
CASP4P49662 RPL21P109-201ENST00000422213 475 ntBASIC4.09□□□□□ -1.75
CASP4P49662 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.09□□□□□ -1.75
CASP4P49662 NDUFB1P1-201ENST00000435191 180 ntBASIC4.09□□□□□ -1.75
CASP4P49662 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.09□□□□□ -1.75
CASP4P49662 CBX1P4-201ENST00000439415 457 ntBASIC4.09□□□□□ -1.75
CASP4P49662 HMGB1P5-202ENST00000451497 985 ntBASIC4.09□□□□□ -1.75
CASP4P49662 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.09□□□□□ -1.75
CASP4P49662 RN7SL93P-201ENST00000463035 293 ntBASIC4.09□□□□□ -1.75
CASP4P49662 AC006511.1-201ENST00000470614 315 ntBASIC4.09□□□□□ -1.75
CASP4P49662 OR9N1P-202ENST00000494289 481 ntBASIC4.09□□□□□ -1.75
CASP4P49662 AC146944.2-203ENST00000502493 354 ntBASIC4.09□□□□□ -1.75
CASP4P49662 AC139495.1-202ENST00000513164 354 ntBASIC4.09□□□□□ -1.75
CASP4P49662 AC007424.1-203ENST00000554613 687 ntBASIC4.09□□□□□ -1.75
CASP4P49662 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.09□□□□□ -1.75
CASP4P49662 AC244505.7-201ENST00000599675 272 ntBASIC4.09□□□□□ -1.75
CASP4P49662 AC010680.3-201ENST00000604215 520 ntBASIC4.09□□□□□ -1.75
CASP4P49662 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CASP4P49662 AL355816.1-201ENST00000607951 118 ntBASIC4.09□□□□□ -1.75
CASP4P49662 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CASP4P49662 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.09□□□□□ -1.75
CASP4P49662 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CASP4P49662 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CASP4P49662 AC015726.3-201ENST00000624501 418 ntBASIC4.09□□□□□ -1.75
CASP4P49662 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.09□□□□□ -1.75
CASP4P49662 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.09□□□□□ -1.75
CASP4P49662 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CASP4P49662 AC024560.2-201ENST00000507981 1497 ntBASIC4.09□□□□□ -1.75
CASP4P49662 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.76
CASP4P49662 AC007529.1-201ENST00000418574 2178 ntBASIC4.09□□□□□ -1.76
CASP4P49662 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.08□□□□□ -1.76
CASP4P49662 AL136964.1-201ENST00000622038 2990 ntBASIC4.08□□□□□ -1.76
CASP4P49662 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.08□□□□□ -1.76
CASP4P49662 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CASP4P49662 OR4A15-201ENST00000314706 1035 ntBASIC4.08□□□□□ -1.76
CASP4P49662 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CASP4P49662 RNU1-18P-201ENST00000363062 164 ntBASIC4.08□□□□□ -1.76
CASP4P49662 U8.11-201ENST00000384699 133 ntBASIC4.08□□□□□ -1.76
CASP4P49662 U8.12-201ENST00000384701 133 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms