Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 C1DP3-201ENST00000455013 423 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 HSPE1P22-201ENST00000456856 327 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 AC073522.1-201ENST00000483312 377 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 MTND3P6-201ENST00000485242 339 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.68□□□□□ -1.82
CXCL12P48061 AC090136.1-201ENST00000520009 240 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 IGLV3-26-201ENST00000520756 302 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.68□□□□□ -1.82
CXCL12P48061 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.68□□□□□ -1.82
CXCL12P48061 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
CXCL12P48061 AL121766.1-201ENST00000547436 487 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.68□□□□□ -1.82
CXCL12P48061 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.68□□□□□ -1.82
CXCL12P48061 MIR4513-201ENST00000581077 86 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CXCL12P48061 YPEL5P2-201ENST00000605553 359 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.68□□□□□ -1.82
CXCL12P48061 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.68□□□□□ -1.82
CXCL12P48061 AC009237.17-201ENST00000618111 748 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.68□□□□□ -1.82
CXCL12P48061 AP000553.6-201ENST00000641242 118 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL12P48061 AL133383.2-201ENST00000622958 2336 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL12P48061 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
CXCL12P48061 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL12P48061 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL12P48061 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL12P48061 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL12P48061 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL12P48061 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CXCL12P48061 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL12P48061 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.67□□□□□ -1.82
CXCL12P48061 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.67□□□□□ -1.82
CXCL12P48061 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL12P48061 RPF2P1-201ENST00000424137 906 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 RPL7P44-201ENST00000424827 742 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 AC005300.1-201ENST00000428401 373 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL12P48061 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL12P48061 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL12P48061 AC006511.1-201ENST00000470614 315 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 RPL7P23-201ENST00000493874 747 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL12P48061 RN7SKP289-201ENST00000517244 295 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CXCL12P48061 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.67□□□□□ -1.82
CXCL12P48061 AL163642.2-201ENST00000604722 1019 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 AC135507.2-201ENST00000612443 309 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 AC079684.1-201ENST00000621405 437 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CXCL12P48061 OR10AB1P-202ENST00000641219 1686 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.67□□□□□ -1.82
CXCL12P48061 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CXCL12P48061 AC012020.1-201ENST00000624541 1728 ntBASIC3.67□□□□□ -1.82
CXCL12P48061 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CXCL12P48061 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.67□□□□□ -1.82
CXCL12P48061 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CXCL12P48061 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.66□□□□□ -1.82
CXCL12P48061 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.66□□□□□ -1.82
CXCL12P48061 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL12P48061 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.66□□□□□ -1.82
CXCL12P48061 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL12P48061 HSPA8P17-201ENST00000427029 1382 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
CXCL12P48061 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL12P48061 AC107021.2-201ENST00000567714 2095 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.66□□□□□ -1.82
CXCL12P48061 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CXCL12P48061 DDX18P4-201ENST00000511690 1966 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL12P48061 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CXCL12P48061 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL12P48061 OR6K3-202ENST00000368146 996 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 SNORA48.5-201ENST00000391143 135 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 ATP5JP1-201ENST00000431631 322 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 AL138787.1-202ENST00000437804 898 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.66□□□□□ -1.82
CXCL12P48061 AC010655.1-201ENST00000449336 292 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 RPL31P53-201ENST00000457065 348 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.66□□□□□ -1.82
CXCL12P48061 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.66□□□□□ -1.82
CXCL12P48061 FTH1P9-201ENST00000513251 355 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 TCP11X3P-202ENST00000514289 1254 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 RNU6-551P-201ENST00000516661 103 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.66□□□□□ -1.82
CXCL12P48061 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.66□□□□□ -1.82
CXCL12P48061 AC090819.1-201ENST00000523800 1111 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL12P48061 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.66□□□□□ -1.82
CXCL12P48061 AC024224.1-201ENST00000538284 609 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL12P48061 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL12P48061 AC068790.5-201ENST00000602741 355 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 AL137849.1-201ENST00000604767 169 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CXCL12P48061 AC026979.4-201ENST00000606555 645 ntBASIC3.66□□□□□ -1.82
CXCL12P48061 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 233.7 ms