Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 NACA3P-201ENST00000359690 648 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NKX2-1P43699 MIR649-201ENST00000384843 97 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AC136624.1-201ENST00000400791 413 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AC004690.1-201ENST00000418216 328 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 RPS15AP40-201ENST00000419621 391 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 LINC00993-201ENST00000420453 540 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 MRPS36P1-201ENST00000421291 307 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 RPL21P43-201ENST00000425440 472 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 OR4F13P-201ENST00000428478 931 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 RPL21P91-201ENST00000429231 479 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 MTND5P25-201ENST00000430499 799 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-1P43699 OR52B5P-201ENST00000435337 951 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-1P43699 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AC011753.3-201ENST00000443436 406 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AL137845.2-201ENST00000444292 988 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-1P43699 COX6CP18-201ENST00000448769 222 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-1P43699 RFC5P1-201ENST00000454419 874 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-1P43699 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.82□□□□□ -1.8
NKX2-1P43699 RN7SL319P-201ENST00000480656 221 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC108734.3-201ENST00000481241 1165 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-1P43699 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-1P43699 RNF138P1-201ENST00000502765 546 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC084024.2-201ENST00000503480 791 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 PPBPP1-201ENST00000510807 373 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-1P43699 RNA5SP446-201ENST00000515955 82 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC008694.2-201ENST00000517591 306 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 MYL12AP1-201ENST00000518490 515 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AP001189.2-201ENST00000527320 189 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-1P43699 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
NKX2-1P43699 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-1P43699 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-1P43699 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AADACP1-206ENST00000561502 1193 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC002400.1-201ENST00000569310 726 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 MIR4504-201ENST00000577413 92 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC005412.1-201ENST00000580812 1049 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-1P43699 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AC126915.2-201ENST00000610957 190 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX2-1P43699 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC068722.2-201ENST00000618734 544 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 AC022509.4-201ENST00000621404 572 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-1P43699 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-1P43699 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-1P43699 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-1P43699 AC117529.2-201ENST00000512159 2068 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-1P43699 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-1P43699 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-1P43699 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX2-1P43699 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-1P43699 AC104454.1-201ENST00000421341 1401 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 Z98755.1-201ENST00000407015 1384 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 RNU6-984P-201ENST00000363236 109 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 RNU6-921P-201ENST00000384361 107 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 SNORA70-201ENST00000384436 135 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 MIR506-201ENST00000384998 124 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 MIR223-201ENST00000385204 110 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AL590762.2-201ENST00000395798 571 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 LAP3P1-201ENST00000403648 294 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AL391361.1-201ENST00000405580 489 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 ZNF603P-201ENST00000405613 487 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 DUTP5-201ENST00000406790 469 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AC069218.2-201ENST00000411665 344 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AL133384.1-201ENST00000412744 351 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms