Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.18□□□□□ -1.58
POLR2AP24928 AC005410.1-202ENST00000460347 485 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 RPS20P4-201ENST00000461659 355 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AC090589.1-201ENST00000473109 362 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AC146944.2-203ENST00000502493 354 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 MYL12BP2-201ENST00000503948 512 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.18□□□□□ -1.58
POLR2AP24928 AC139495.1-202ENST00000513164 354 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 AP000619.3-201ENST00000535634 1127 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.18□□□□□ -1.58
POLR2AP24928 MIR6075-201ENST00000620782 95 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 MIR4278-201ENST00000636094 69 ntBASIC5.18□□□□□ -1.58
POLR2AP24928 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
POLR2AP24928 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
POLR2AP24928 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
POLR2AP24928 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
POLR2AP24928 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
POLR2AP24928 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
POLR2AP24928 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
POLR2AP24928 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.17□□□□□ -1.58
POLR2AP24928 SNORD113-6-201ENST00000363345 75 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 RNU6ATAC-201ENST00000408749 126 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 AC004022.2-201ENST00000413824 193 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.17□□□□□ -1.58
POLR2AP24928 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.17□□□□□ -1.58
POLR2AP24928 RPL21P91-201ENST00000429231 479 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 AL445584.1-201ENST00000431451 330 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.17□□□□□ -1.58
POLR2AP24928 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.17□□□□□ -1.58
POLR2AP24928 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.17□□□□□ -1.58
POLR2AP24928 AL024509.2-201ENST00000493462 493 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 AC092045.1-201ENST00000495716 1231 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 AC104164.2-201ENST00000496953 495 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 AC022447.1-201ENST00000515358 464 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.17□□□□□ -1.58
POLR2AP24928 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.17□□□□□ -1.58
POLR2AP24928 GTF2IP22-201ENST00000554443 182 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.17□□□□□ -1.58
POLR2AP24928 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.17□□□□□ -1.58
POLR2AP24928 OR7A8P-201ENST00000595427 913 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.17□□□□□ -1.58
POLR2AP24928 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.17□□□□□ -1.58
POLR2AP24928 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
POLR2AP24928 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.17□□□□□ -1.58
POLR2AP24928 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
POLR2AP24928 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
POLR2AP24928 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
POLR2AP24928 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
POLR2AP24928 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
POLR2AP24928 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
POLR2AP24928 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
POLR2AP24928 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.17□□□□□ -1.58
POLR2AP24928 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.17□□□□□ -1.58
POLR2AP24928 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
POLR2AP24928 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
POLR2AP24928 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
POLR2AP24928 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
POLR2AP24928 RNU1-14P-201ENST00000362759 152 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 Y_RNA.88-201ENST00000363029 99 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.16□□□□□ -1.58
POLR2AP24928 AC108032.1-201ENST00000416706 207 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.16□□□□□ -1.58
POLR2AP24928 RAB9AP5-201ENST00000437794 597 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 MTND5P2-201ENST00000442927 1142 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 RAB9AP2-201ENST00000443911 597 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AC245028.2-201ENST00000458673 253 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.16□□□□□ -1.58
POLR2AP24928 AC068724.1-201ENST00000487100 792 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.16□□□□□ -1.58
POLR2AP24928 AC026414.1-201ENST00000504046 698 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AC021146.7-201ENST00000509604 775 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 PARP4P3-201ENST00000510265 317 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.16□□□□□ -1.58
POLR2AP24928 RSL24D1P11-201ENST00000591045 491 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.16□□□□□ -1.58
POLR2AP24928 AC009509.4-201ENST00000619202 509 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.16□□□□□ -1.58
POLR2AP24928 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
POLR2AP24928 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
POLR2AP24928 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.16□□□□□ -1.58
POLR2AP24928 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.16□□□□□ -1.58
POLR2AP24928 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
POLR2AP24928 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
POLR2AP24928 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
POLR2AP24928 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
POLR2AP24928 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.16□□□□□ -1.58
POLR2AP24928 RNA5SP130-201ENST00000364431 114 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 RNU11-201ENST00000387069 134 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 RPL26P37-201ENST00000411983 438 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.16□□□□□ -1.58
POLR2AP24928 DHX9P1-201ENST00000436565 3076 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms