Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.45□□□□□ -1.86
USF1P22415 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.45□□□□□ -1.86
USF1P22415 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.45□□□□□ -1.86
USF1P22415 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.45□□□□□ -1.86
USF1P22415 AC124068.1-201ENST00000563131 678 ntBASIC3.45□□□□□ -1.86
USF1P22415 MTATP6P25-201ENST00000574491 261 ntBASIC3.45□□□□□ -1.86
USF1P22415 AC107982.3-201ENST00000584957 985 ntBASIC3.45□□□□□ -1.86
USF1P22415 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.45□□□□□ -1.86
USF1P22415 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.45□□□□□ -1.86
USF1P22415 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.45□□□□□ -1.86
USF1P22415 AL136964.1-201ENST00000622038 2990 ntBASIC3.45□□□□□ -1.86
USF1P22415 AC024023.1-201ENST00000624530 922 ntBASIC3.45□□□□□ -1.86
USF1P22415 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.45□□□□□ -1.86
USF1P22415 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USF1P22415 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
USF1P22415 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USF1P22415 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USF1P22415 AC116667.1-201ENST00000604855 2072 ntBASIC3.45□□□□□ -1.86
USF1P22415 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
USF1P22415 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.45□□□□□ -1.86
USF1P22415 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
USF1P22415 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
USF1P22415 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.44□□□□□ -1.86
USF1P22415 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.44□□□□□ -1.86
USF1P22415 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
USF1P22415 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
USF1P22415 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
USF1P22415 AL138878.1-201ENST00000405131 347 ntBASIC3.44□□□□□ -1.86
USF1P22415 AC010385.1-201ENST00000412374 256 ntBASIC3.44□□□□□ -1.86
USF1P22415 HSPE1P12-201ENST00000412576 301 ntBASIC3.44□□□□□ -1.86
USF1P22415 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.44□□□□□ -1.86
USF1P22415 MTND2P15-201ENST00000418575 892 ntBASIC3.44□□□□□ -1.86
USF1P22415 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.44□□□□□ -1.86
USF1P22415 AC018644.1-201ENST00000429934 551 ntBASIC3.44□□□□□ -1.86
USF1P22415 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USF1P22415 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.44□□□□□ -1.86
USF1P22415 ELOCP8-201ENST00000439309 332 ntBASIC3.44□□□□□ -1.86
USF1P22415 ELOCP15-201ENST00000442090 332 ntBASIC3.44□□□□□ -1.86
USF1P22415 RAD23BP3-201ENST00000454157 1152 ntBASIC3.44□□□□□ -1.86
USF1P22415 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.44□□□□□ -1.86
USF1P22415 RPL7P15-201ENST00000461190 712 ntBASIC3.44□□□□□ -1.86
USF1P22415 RN7SL585P-201ENST00000470538 280 ntBASIC3.44□□□□□ -1.86
USF1P22415 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USF1P22415 AC104164.2-201ENST00000496953 495 ntBASIC3.44□□□□□ -1.86
USF1P22415 AC068305.1-201ENST00000497406 726 ntBASIC3.44□□□□□ -1.86
USF1P22415 AC111193.1-201ENST00000504097 155 ntBASIC3.44□□□□□ -1.86
USF1P22415 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.44□□□□□ -1.86
USF1P22415 MTCO1P31-201ENST00000506355 492 ntBASIC3.44□□□□□ -1.86
USF1P22415 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.44□□□□□ -1.86
USF1P22415 RNU6-751P-201ENST00000516382 101 ntBASIC3.44□□□□□ -1.86
USF1P22415 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
USF1P22415 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.44□□□□□ -1.86
USF1P22415 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.44□□□□□ -1.86
USF1P22415 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.44□□□□□ -1.86
USF1P22415 AL121594.4-201ENST00000556211 1196 ntBASIC3.44□□□□□ -1.86
USF1P22415 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.44□□□□□ -1.86
USF1P22415 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.44□□□□□ -1.86
USF1P22415 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.44□□□□□ -1.86
USF1P22415 AC112230.1-201ENST00000604342 547 ntBASIC3.44□□□□□ -1.86
USF1P22415 AC115621.1-201ENST00000604653 858 ntBASIC3.44□□□□□ -1.86
USF1P22415 CR589904.2-201ENST00000612533 440 ntBASIC3.44□□□□□ -1.86
USF1P22415 U6.48-201ENST00000618523 106 ntBASIC3.44□□□□□ -1.86
USF1P22415 AC233309.1-201ENST00000619522 751 ntBASIC3.44□□□□□ -1.86
USF1P22415 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.44□□□□□ -1.86
USF1P22415 CR392039.5-201ENST00000623201 510 ntBASIC3.44□□□□□ -1.86
USF1P22415 AC138907.10-201ENST00000623708 983 ntBASIC3.44□□□□□ -1.86
USF1P22415 AC112200.1-201ENST00000625015 234 ntBASIC3.44□□□□□ -1.86
USF1P22415 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USF1P22415 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USF1P22415 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
USF1P22415 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
USF1P22415 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USF1P22415 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USF1P22415 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
USF1P22415 EXOC5P1-201ENST00000510543 1969 ntBASIC3.43□□□□□ -1.86
USF1P22415 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
USF1P22415 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
USF1P22415 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USF1P22415 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USF1P22415 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.43□□□□□ -1.86
USF1P22415 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USF1P22415 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
USF1P22415 AC007685.1-201ENST00000329806 452 ntBASIC3.43□□□□□ -1.86
USF1P22415 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.43□□□□□ -1.86
USF1P22415 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.43□□□□□ -1.86
USF1P22415 ZNF603P-201ENST00000405613 487 ntBASIC3.43□□□□□ -1.86
USF1P22415 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.43□□□□□ -1.86
USF1P22415 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.43□□□□□ -1.86
USF1P22415 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.43□□□□□ -1.86
USF1P22415 OR5BE1P-201ENST00000425977 939 ntBASIC3.43□□□□□ -1.86
USF1P22415 AL590623.1-201ENST00000427864 105 ntBASIC3.43□□□□□ -1.86
USF1P22415 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.43□□□□□ -1.86
USF1P22415 AL050321.1-201ENST00000432363 400 ntBASIC3.43□□□□□ -1.86
USF1P22415 AL035246.1-201ENST00000433554 1255 ntBASIC3.43□□□□□ -1.86
USF1P22415 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.43□□□□□ -1.86
USF1P22415 RPL23AP89-201ENST00000439324 255 ntBASIC3.43□□□□□ -1.86
USF1P22415 HMGB1P16-201ENST00000447155 540 ntBASIC3.43□□□□□ -1.86
USF1P22415 AL133547.1-201ENST00000448546 220 ntBASIC3.43□□□□□ -1.86
USF1P22415 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.43□□□□□ -1.86
USF1P22415 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms