Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 RNA5SP366-201ENST00000365454 123 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 AL049693.1-201ENST00000402760 611 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 PTGES3P2-201ENST00000407942 482 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 RPL7P53-201ENST00000421245 739 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 AL390879.2-203ENST00000426943 1121 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 HMGB1P45-201ENST00000435986 653 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 AL590399.6-201ENST00000446396 307 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 RPL21P71-201ENST00000465598 459 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 SETP6-201ENST00000479329 568 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 AC078817.1-201ENST00000492623 435 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 RPL5P23-201ENST00000496040 868 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 HPRT1P2-201ENST00000505250 544 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 PARP4P3-201ENST00000510265 317 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 RNU6-488P-201ENST00000515918 99 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 IFITM8P-201ENST00000522529 394 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 OR5M7P-201ENST00000526140 972 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 AP003168.1-201ENST00000530091 307 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 AC063950.1-201ENST00000552036 308 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 MTCYBP28-201ENST00000566728 1132 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 RN7SL176P-201ENST00000580352 264 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 VN1R79P-201ENST00000593540 513 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 IPO5P1-202ENST00000600039 287 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 MIR6798-201ENST00000612887 67 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 MIR8084-201ENST00000614105 89 ntBASIC4.25□□□□□ -1.73
HLA-DPA1P20036 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPA1P20036 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 MTCO1P24-201ENST00000515438 1558 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 RNU6-1151P-201ENST00000384684 107 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 RNU6-77P-201ENST00000410554 91 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AC004690.1-201ENST00000418216 328 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 MTATP6P11-201ENST00000428071 670 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AC005002.1-201ENST00000447458 540 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 RN7SL385P-201ENST00000468873 276 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AP000893.1-201ENST00000474462 794 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 TMEM248P1-201ENST00000510579 951 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 RN7SKP122-201ENST00000515923 296 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AC138701.1-201ENST00000524329 714 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AC105233.3-201ENST00000531125 744 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 GLRXP2-201ENST00000555594 321 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 TVP23BP1-201ENST00000557500 617 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AC023824.3-201ENST00000569003 562 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AC006270.2-201ENST00000578523 652 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 MIR4697-201ENST00000582977 78 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AL161729.3-201ENST00000603533 673 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AL162574.2-201ENST00000614618 657 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AC083809.1-201ENST00000615051 472 ntBASIC4.24□□□□□ -1.73
HLA-DPA1P20036 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DPA1P20036 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DPA1P20036 AC011266.1-201ENST00000624119 3569 ntBASIC4.23□□□□□ -1.73
HLA-DPA1P20036 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPA1P20036 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPA1P20036 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms