Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL139286.1-201ENST00000604465 483 ntBASIC6.36□□□□□ -1.39
LIG1P18858 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.36□□□□□ -1.39
LIG1P18858 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.36□□□□□ -1.39
LIG1P18858 AP003400.3-201ENST00000624904 346 ntBASIC6.36□□□□□ -1.39
LIG1P18858 AL355480.1-201ENST00000629041 99 ntBASIC6.36□□□□□ -1.39
LIG1P18858 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.36□□□□□ -1.39
LIG1P18858 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LIG1P18858 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LIG1P18858 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LIG1P18858 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.36□□□□□ -1.39
LIG1P18858 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
LIG1P18858 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.36□□□□□ -1.39
LIG1P18858 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 MRE11P1-201ENST00000464884 2127 ntBASIC6.35□□□□□ -1.39
LIG1P18858 ZNF37BP-203ENST00000452306 1352 ntBASIC6.35□□□□□ -1.39
LIG1P18858 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.35□□□□□ -1.39
LIG1P18858 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.35□□□□□ -1.39
LIG1P18858 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.35□□□□□ -1.39
LIG1P18858 Y_RNA.97-201ENST00000363094 102 ntBASIC6.35□□□□□ -1.39
LIG1P18858 RNA5SP435-201ENST00000364044 108 ntBASIC6.35□□□□□ -1.39
LIG1P18858 Y_RNA.295-201ENST00000364918 102 ntBASIC6.35□□□□□ -1.39
LIG1P18858 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.35□□□□□ -1.39
LIG1P18858 SNORA17A-201ENST00000391185 133 ntBASIC6.35□□□□□ -1.39
LIG1P18858 AL356057.2-201ENST00000403318 432 ntBASIC6.35□□□□□ -1.39
LIG1P18858 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.35□□□□□ -1.39
LIG1P18858 AL590609.2-201ENST00000421430 368 ntBASIC6.35□□□□□ -1.39
LIG1P18858 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
LIG1P18858 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.35□□□□□ -1.39
LIG1P18858 FHP1-201ENST00000442741 703 ntBASIC6.35□□□□□ -1.39
LIG1P18858 PPIAP20-201ENST00000449839 135 ntBASIC6.35□□□□□ -1.39
LIG1P18858 USP9YP12-201ENST00000450481 570 ntBASIC6.35□□□□□ -1.39
LIG1P18858 RPL18AP17-201ENST00000455326 198 ntBASIC6.35□□□□□ -1.39
LIG1P18858 AC091564.1-201ENST00000464563 479 ntBASIC6.35□□□□□ -1.39
LIG1P18858 AC022215.1-201ENST00000481770 362 ntBASIC6.35□□□□□ -1.39
LIG1P18858 MTCYBP17-201ENST00000503579 789 ntBASIC6.35□□□□□ -1.39
LIG1P18858 MTND5P5-201ENST00000503764 376 ntBASIC6.35□□□□□ -1.39
LIG1P18858 HMGB1P28-201ENST00000507778 552 ntBASIC6.35□□□□□ -1.39
LIG1P18858 SAP18P1-201ENST00000512058 390 ntBASIC6.35□□□□□ -1.39
LIG1P18858 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.35□□□□□ -1.39
LIG1P18858 MTCO1P30-201ENST00000515244 580 ntBASIC6.35□□□□□ -1.39
LIG1P18858 RNA5SP216-201ENST00000516111 123 ntBASIC6.35□□□□□ -1.39
LIG1P18858 RNU6-1261P-201ENST00000517194 104 ntBASIC6.35□□□□□ -1.39
LIG1P18858 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.35□□□□□ -1.39
LIG1P18858 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.35□□□□□ -1.39
LIG1P18858 AC068993.1-201ENST00000546724 589 ntBASIC6.35□□□□□ -1.39
LIG1P18858 TRAV15-201ENST00000556680 249 ntBASIC6.35□□□□□ -1.39
LIG1P18858 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.35□□□□□ -1.39
LIG1P18858 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.35□□□□□ -1.39
LIG1P18858 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 PART1_1.1-201ENST00000611761 217 ntBASIC6.35□□□□□ -1.39
LIG1P18858 AC008250.2-201ENST00000615261 205 ntBASIC6.35□□□□□ -1.39
LIG1P18858 RN7SL544P-201ENST00000617232 284 ntBASIC6.35□□□□□ -1.39
LIG1P18858 RN7SL763P-201ENST00000620922 284 ntBASIC6.35□□□□□ -1.39
LIG1P18858 SNORA17.5-201ENST00000630429 132 ntBASIC6.35□□□□□ -1.39
LIG1P18858 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.35□□□□□ -1.39
LIG1P18858 AC093591.3-201ENST00000634516 308 ntBASIC6.35□□□□□ -1.39
LIG1P18858 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.35□□□□□ -1.39
LIG1P18858 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
LIG1P18858 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
LIG1P18858 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.35□□□□□ -1.39
LIG1P18858 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LIG1P18858 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
LIG1P18858 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.35□□□□□ -1.39
LIG1P18858 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
LIG1P18858 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIG1P18858 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIG1P18858 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.34□□□□□ -1.39
LIG1P18858 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIG1P18858 DBF4P1-201ENST00000412976 1892 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AC100757.1-201ENST00000616872 1835 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.34□□□□□ -1.39
LIG1P18858 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LIG1P18858 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
LIG1P18858 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.34□□□□□ -1.39
LIG1P18858 Y_RNA.160-201ENST00000363677 92 ntBASIC6.34□□□□□ -1.39
LIG1P18858 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
LIG1P18858 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
LIG1P18858 PPIAP9-201ENST00000403866 498 ntBASIC6.34□□□□□ -1.39
LIG1P18858 EEF1A1P40-201ENST00000412883 573 ntBASIC6.34□□□□□ -1.39
LIG1P18858 OR2AT2P-201ENST00000413438 905 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.34□□□□□ -1.39
LIG1P18858 FCF1P2-201ENST00000415284 583 ntBASIC6.34□□□□□ -1.39
LIG1P18858 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AC009302.1-201ENST00000417147 390 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AL662874.1-201ENST00000426065 230 ntBASIC6.34□□□□□ -1.39
LIG1P18858 RPL7P56-201ENST00000429441 717 ntBASIC6.34□□□□□ -1.39
LIG1P18858 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.34□□□□□ -1.39
LIG1P18858 RPL7L1P1-201ENST00000448259 785 ntBASIC6.34□□□□□ -1.39
LIG1P18858 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.34□□□□□ -1.39
LIG1P18858 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.34□□□□□ -1.39
LIG1P18858 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms