Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MTND2P11-201ENST00000423638 648 ntBASIC3.89□□□□□ -1.79
COL11A1P12107 BX119904.1-201ENST00000432026 348 ntBASIC3.89□□□□□ -1.79
COL11A1P12107 AL356535.1-201ENST00000440335 398 ntBASIC3.89□□□□□ -1.79
COL11A1P12107 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.89□□□□□ -1.79
COL11A1P12107 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL11A1P12107 AC069499.1-201ENST00000489433 509 ntBASIC3.89□□□□□ -1.79
COL11A1P12107 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.89□□□□□ -1.79
COL11A1P12107 AC004069.2-201ENST00000505438 1114 ntBASIC3.89□□□□□ -1.79
COL11A1P12107 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.89□□□□□ -1.79
COL11A1P12107 PTGES3P3-201ENST00000511479 482 ntBASIC3.89□□□□□ -1.79
COL11A1P12107 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.89□□□□□ -1.79
COL11A1P12107 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.89□□□□□ -1.79
COL11A1P12107 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL11A1P12107 AC024224.1-201ENST00000538284 609 ntBASIC3.89□□□□□ -1.79
COL11A1P12107 AC233309.1-201ENST00000619522 751 ntBASIC3.89□□□□□ -1.79
COL11A1P12107 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
COL11A1P12107 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL11A1P12107 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.89□□□□□ -1.79
COL11A1P12107 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL11A1P12107 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL11A1P12107 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
COL11A1P12107 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 RNU1-18P-201ENST00000363062 164 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 HSPE1P8-201ENST00000406997 288 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 HMGN1P24-201ENST00000412282 298 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.88□□□□□ -1.79
COL11A1P12107 RPL5P24-201ENST00000463742 885 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
COL11A1P12107 DUXAP6-201ENST00000553858 601 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.88□□□□□ -1.79
COL11A1P12107 OR1AB1P-201ENST00000585564 761 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 AC006946.3-201ENST00000609791 756 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC3.88□□□□□ -1.79
COL11A1P12107 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.88□□□□□ -1.79
COL11A1P12107 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
COL11A1P12107 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
COL11A1P12107 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
COL11A1P12107 TNPO1P3-201ENST00000436471 2662 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.88□□□□□ -1.79
COL11A1P12107 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 OR10J6P-201ENST00000289731 930 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 AL136131.1-201ENST00000406079 803 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 AL031121.1-201ENST00000406553 254 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 BX842559.1-201ENST00000419615 532 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.88□□□□□ -1.79
COL11A1P12107 AC006994.1-201ENST00000438212 839 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 NANOGNBP1-201ENST00000448444 480 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 AC005229.2-201ENST00000456995 399 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.88□□□□□ -1.79
COL11A1P12107 HIGD1AP1-201ENST00000550979 275 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 MIR7851-201ENST00000610611 160 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 AL158062.1-201ENST00000619632 745 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.88□□□□□ -1.79
COL11A1P12107 NMD3P1-201ENST00000439704 1488 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
COL11A1P12107 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
COL11A1P12107 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
COL11A1P12107 MTND5P12-201ENST00000502851 1449 ntBASIC3.88□□□□□ -1.79
COL11A1P12107 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL11A1P12107 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
COL11A1P12107 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
COL11A1P12107 LINC02471-203ENST00000641941 4752 ntBASIC3.87□□□□□ -1.79
COL11A1P12107 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
COL11A1P12107 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL11A1P12107 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL11A1P12107 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.87□□□□□ -1.79
COL11A1P12107 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.87□□□□□ -1.79
COL11A1P12107 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.87□□□□□ -1.79
COL11A1P12107 RN7SL807P-201ENST00000470923 297 ntBASIC3.87□□□□□ -1.79
COL11A1P12107 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.87□□□□□ -1.79
COL11A1P12107 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.87□□□□□ -1.79
COL11A1P12107 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.87□□□□□ -1.79
COL11A1P12107 AL390334.1-201ENST00000556395 450 ntBASIC3.87□□□□□ -1.79
COL11A1P12107 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.87□□□□□ -1.79
COL11A1P12107 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.87□□□□□ -1.79
COL11A1P12107 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL11A1P12107 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.87□□□□□ -1.79
COL11A1P12107 AC024341.1-201ENST00000526444 1552 ntBASIC3.87□□□□□ -1.79
COL11A1P12107 AC119744.1-201ENST00000454746 1715 ntBASIC3.87□□□□□ -1.79
COL11A1P12107 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.87□□□□□ -1.79
COL11A1P12107 AL353743.1-202ENST00000431724 1695 ntBASIC3.87□□□□□ -1.79
COL11A1P12107 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL11A1P12107 AC018555.1-201ENST00000567548 1980 ntBASIC3.87□□□□□ -1.79
COL11A1P12107 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL11A1P12107 MIR1289-1-201ENST00000408836 144 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 AC004552.1-201ENST00000419089 348 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.86□□□□□ -1.79
COL11A1P12107 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL11A1P12107 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.86□□□□□ -1.79
COL11A1P12107 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.86□□□□□ -1.79
COL11A1P12107 RPS26P3-201ENST00000470205 348 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms