Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.88□□□□□ -1.47
TOP2AP11388 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.88□□□□□ -1.47
TOP2AP11388 AC006989.1-201ENST00000427212 131 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 RPS26P47-201ENST00000427219 348 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 AC025750.2-201ENST00000442609 450 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 RPS26P3-201ENST00000470205 348 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 AC004057.1-201ENST00000485827 348 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.88□□□□□ -1.47
TOP2AP11388 FTH1P9-201ENST00000513251 355 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 AC113192.3-201ENST00000529152 742 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 LARP7P3-201ENST00000579888 337 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 AL139395.1-201ENST00000603662 160 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 BRDTP1-201ENST00000605735 677 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 AC024023.1-201ENST00000624530 922 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.88□□□□□ -1.47
TOP2AP11388 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.88□□□□□ -1.47
TOP2AP11388 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TOP2AP11388 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TOP2AP11388 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOP2AP11388 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.87□□□□□ -1.47
TOP2AP11388 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOP2AP11388 AC083843.3-201ENST00000623679 2186 ntBASIC5.87□□□□□ -1.47
TOP2AP11388 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOP2AP11388 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOP2AP11388 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
TOP2AP11388 RNA5SP104-201ENST00000410989 118 ntBASIC5.87□□□□□ -1.47
TOP2AP11388 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TOP2AP11388 RPS3AP43-201ENST00000479743 781 ntBASIC5.87□□□□□ -1.47
TOP2AP11388 HIGD1AP1-201ENST00000550979 275 ntBASIC5.87□□□□□ -1.47
TOP2AP11388 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.87□□□□□ -1.47
TOP2AP11388 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TOP2AP11388 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.87□□□□□ -1.47
TOP2AP11388 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.87□□□□□ -1.47
TOP2AP11388 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.87□□□□□ -1.47
TOP2AP11388 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TOP2AP11388 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TOP2AP11388 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.86□□□□□ -1.47
TOP2AP11388 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.86□□□□□ -1.47
TOP2AP11388 OR2X1P-201ENST00000421144 687 ntBASIC5.86□□□□□ -1.47
TOP2AP11388 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TOP2AP11388 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.86□□□□□ -1.47
TOP2AP11388 AL451007.1-201ENST00000595491 289 ntBASIC5.86□□□□□ -1.47
TOP2AP11388 AC100793.4-201ENST00000613683 429 ntBASIC5.86□□□□□ -1.47
TOP2AP11388 AC119674.1-212ENST00000641155 993 ntBASIC5.86□□□□□ -1.47
TOP2AP11388 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TOP2AP11388 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TOP2AP11388 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TOP2AP11388 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.86□□□□□ -1.47
TOP2AP11388 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TOP2AP11388 SNORA7.4-201ENST00000384249 137 ntBASIC5.85□□□□□ -1.47
TOP2AP11388 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.85□□□□□ -1.47
TOP2AP11388 AL353678.1-201ENST00000422735 741 ntBASIC5.85□□□□□ -1.47
TOP2AP11388 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TOP2AP11388 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.85□□□□□ -1.47
TOP2AP11388 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.85□□□□□ -1.47
TOP2AP11388 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.85□□□□□ -1.47
TOP2AP11388 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.85□□□□□ -1.47
TOP2AP11388 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.85□□□□□ -1.47
TOP2AP11388 AL596275.2-204ENST00000641628 552 ntBASIC5.85□□□□□ -1.47
TOP2AP11388 AL596275.2-206ENST00000641957 626 ntBASIC5.85□□□□□ -1.47
TOP2AP11388 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.85□□□□□ -1.47
TOP2AP11388 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.84□□□□□ -1.47
TOP2AP11388 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TOP2AP11388 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.84□□□□□ -1.47
TOP2AP11388 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.84□□□□□ -1.47
TOP2AP11388 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.84□□□□□ -1.47
TOP2AP11388 CCRL1P1-201ENST00000449542 1053 ntBASIC5.84□□□□□ -1.47
TOP2AP11388 MTND6P32-201ENST00000457611 483 ntBASIC5.84□□□□□ -1.47
TOP2AP11388 AC090589.1-201ENST00000473109 362 ntBASIC5.84□□□□□ -1.47
TOP2AP11388 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.84□□□□□ -1.47
TOP2AP11388 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.84□□□□□ -1.47
TOP2AP11388 HNRNPKP5-201ENST00000515300 253 ntBASIC5.84□□□□□ -1.47
TOP2AP11388 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.84□□□□□ -1.47
TOP2AP11388 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.84□□□□□ -1.47
TOP2AP11388 MIR2682-201ENST00000580305 110 ntBASIC5.84□□□□□ -1.47
TOP2AP11388 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.84□□□□□ -1.47
TOP2AP11388 AL583832.1-201ENST00000603227 784 ntBASIC5.84□□□□□ -1.47
TOP2AP11388 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
TOP2AP11388 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TOP2AP11388 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.84□□□□□ -1.47
TOP2AP11388 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TOP2AP11388 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.84□□□□□ -1.47
TOP2AP11388 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TOP2AP11388 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TOP2AP11388 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
TOP2AP11388 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TOP2AP11388 RNU6-1279P-201ENST00000383917 103 ntBASIC5.84□□□□□ -1.48
TOP2AP11388 AL024507.1-201ENST00000412741 274 ntBASIC5.84□□□□□ -1.48
TOP2AP11388 RPL23AP82-202ENST00000427528 469 ntBASIC5.84□□□□□ -1.48
TOP2AP11388 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.84□□□□□ -1.48
TOP2AP11388 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.84□□□□□ -1.48
TOP2AP11388 CENPBD1P1-201ENST00000464061 469 ntBASIC5.84□□□□□ -1.48
TOP2AP11388 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.84□□□□□ -1.48
TOP2AP11388 AC034105.3-201ENST00000565294 442 ntBASIC5.84□□□□□ -1.48
TOP2AP11388 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.84□□□□□ -1.48
TOP2AP11388 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC5.83□□□□□ -1.48
TOP2AP11388 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC5.83□□□□□ -1.48
TOP2AP11388 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.83□□□□□ -1.48
TOP2AP11388 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TOP2AP11388 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms