Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 RNA5SP130-201ENST00000364431 114 ntBASIC4.15□□□□□ -1.75
CCDC172P0C7W6 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AC010740.1-201ENST00000417035 684 ntBASIC4.15□□□□□ -1.75
CCDC172P0C7W6 Z97055.1-201ENST00000419730 712 ntBASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AC006463.2-201ENST00000473326 348 ntBASIC4.15□□□□□ -1.75
CCDC172P0C7W6 TRBV8-2-201ENST00000475637 270 ntBASIC4.15□□□□□ -1.75
CCDC172P0C7W6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 RNU2-58P-201ENST00000516403 183 ntBASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AC008083.2-201ENST00000546707 476 ntBASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 MIR3939-201ENST00000582614 106 ntBASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 BRDTP1-201ENST00000605735 677 ntBASIC4.15□□□□□ -1.75
CCDC172P0C7W6 MIR6716-201ENST00000613413 80 ntBASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC172P0C7W6 DCAF13P1-201ENST00000495256 1330 ntBASIC4.15□□□□□ -1.75
CCDC172P0C7W6 AC087565.3-202ENST00000642085 1603 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 AL022722.2-201ENST00000402519 180 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 ZNF602P-201ENST00000405929 924 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 HSPE1P8-201ENST00000406997 288 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 AC114814.2-201ENST00000419195 485 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 HIGD1AP12-201ENST00000427832 281 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 MTCO1P45-201ENST00000431457 267 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 VN1R48P-201ENST00000448149 1036 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 AL390816.3-201ENST00000604527 1066 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 AL137849.1-201ENST00000604767 169 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 AL354760.1-201ENST00000608357 643 ntBASIC4.14□□□□□ -1.75
CCDC172P0C7W6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC172P0C7W6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 ST13P16-201ENST00000401760 781 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 RNU4-6P-201ENST00000410804 122 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 PRELID3BP11-201ENST00000414230 479 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 MTND4P11-201ENST00000417020 1058 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AL356095.1-201ENST00000417217 199 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 BTF3P9-201ENST00000418784 283 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AL392003.1-201ENST00000434394 243 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AC010618.1-201ENST00000469924 477 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AC084198.1-201ENST00000477747 402 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 TRBV12-2-201ENST00000489763 344 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AC034244.2-201ENST00000514668 858 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 NDUFA5P2-201ENST00000519723 344 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 KPNA2P3-201ENST00000584190 848 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AL365503.1-201ENST00000605247 905 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AL355816.1-201ENST00000607951 118 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AC005962.2-201ENST00000611427 652 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 MLECP1-201ENST00000615893 709 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 AC018816.2-201ENST00000621460 353 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 MIR7153-201ENST00000637758 57 ntBASIC4.13□□□□□ -1.75
CCDC172P0C7W6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC172P0C7W6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC172P0C7W6 AC021755.1-201ENST00000559747 1447 ntBASIC4.12□□□□□ -1.75
CCDC172P0C7W6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms