Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNRPA1P09661 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNRPA1P09661 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SNRPA1P09661 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.62□□□□□ -1.51
SNRPA1P09661 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNRPA1P09661 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
SNRPA1P09661 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNRPA1P09661 RNU4-24P-201ENST00000364565 139 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 RNA5SP151-201ENST00000365632 117 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 RNU1-63P-201ENST00000383902 164 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 RSL24D1P4-201ENST00000400938 484 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 MIR921-201ENST00000401133 56 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.62□□□□□ -1.51
SNRPA1P09661 AC062016.2-201ENST00000420950 676 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 MTND1P32-201ENST00000433043 938 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.62□□□□□ -1.51
SNRPA1P09661 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 RPS7P7-201ENST00000463499 571 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 AC093824.1-201ENST00000508796 343 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 XKRY-201ENST00000510392 1100 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 PRELID3BP4-201ENST00000515476 571 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 RNA5SP49-201ENST00000516450 115 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 RNU6-759P-201ENST00000516740 103 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 OR5BC1P-201ENST00000529327 739 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.62□□□□□ -1.51
SNRPA1P09661 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.62□□□□□ -1.51
SNRPA1P09661 AC095057.3-201ENST00000567102 1157 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 MIR5708-201ENST00000579723 85 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 AC103987.3-201ENST00000582071 292 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNRPA1P09661 VN1R85P-201ENST00000601587 426 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SNRPA1P09661 AC091905.2-201ENST00000623143 306 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 LARP1BP1-201ENST00000506036 1359 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNRPA1P09661 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.62□□□□□ -1.51
SNRPA1P09661 MAPK10-286ENST00000641208 8747 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 AL031595.2-201ENST00000624215 19071 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 AL731532.2-201ENST00000623542 1953 ntBASIC5.62□□□□□ -1.51
SNRPA1P09661 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SNRPA1P09661 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SNRPA1P09661 Y_RNA.51-201ENST00000362725 102 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNRPA1P09661 RNU6-549P-201ENST00000384433 107 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 RNU1-13P-201ENST00000384499 162 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 AL583835.1-201ENST00000399570 407 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 AL022722.2-201ENST00000402519 180 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 AL021407.1-201ENST00000404531 386 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNRPA1P09661 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.61□□□□□ -1.51
SNRPA1P09661 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.61□□□□□ -1.51
SNRPA1P09661 RPS20P14-201ENST00000412545 360 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 AC027644.1-201ENST00000419595 298 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.61□□□□□ -1.51
SNRPA1P09661 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNRPA1P09661 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.61□□□□□ -1.51
SNRPA1P09661 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.61□□□□□ -1.51
SNRPA1P09661 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.61□□□□□ -1.51
SNRPA1P09661 AC000367.1-201ENST00000452711 1766 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 AC092754.2-201ENST00000463506 460 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNRPA1P09661 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.61□□□□□ -1.51
SNRPA1P09661 AC026402.1-201ENST00000513642 170 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.61□□□□□ -1.51
SNRPA1P09661 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.61□□□□□ -1.51
SNRPA1P09661 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNRPA1P09661 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 ELOCP32-201ENST00000548625 324 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.61□□□□□ -1.51
SNRPA1P09661 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.61□□□□□ -1.51
SNRPA1P09661 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.61□□□□□ -1.51
SNRPA1P09661 MTCO1P40-201ENST00000574371 625 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNRPA1P09661 AC109454.4-201ENST00000623411 649 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 AC093775.1-201ENST00000624154 1868 ntBASIC5.61□□□□□ -1.51
SNRPA1P09661 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.61□□□□□ -1.51
SNRPA1P09661 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.61□□□□□ -1.51
SNRPA1P09661 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
SNRPA1P09661 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNRPA1P09661 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SNRPA1P09661 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNRPA1P09661 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNRPA1P09661 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNRPA1P09661 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNRPA1P09661 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.6□□□□□ -1.51
SNRPA1P09661 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNRPA1P09661 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNRPA1P09661 Y_RNA.465-201ENST00000384293 102 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 RPS27AP11-201ENST00000402798 447 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 AL079342.2-201ENST00000403367 482 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms