Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC2.8□□□□□ -1.96
CXCL1P09341 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.8□□□□□ -1.96
CXCL1P09341 AC105402.2-201ENST00000438503 358 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 AL138799.3-201ENST00000438968 350 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL1P09341 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC2.8□□□□□ -1.96
CXCL1P09341 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL1P09341 HMGB3P30-201ENST00000457863 606 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.8□□□□□ -1.96
CXCL1P09341 TSACC-207ENST00000470342 601 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL1P09341 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
CXCL1P09341 AC021205.2-201ENST00000480069 347 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 AC078817.1-201ENST00000492623 435 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 AC108078.3-201ENST00000502633 489 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC2.8□□□□□ -1.96
CXCL1P09341 AC008638.1-201ENST00000506035 866 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.8□□□□□ -1.96
CXCL1P09341 RNA5SP179-201ENST00000517284 121 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.8□□□□□ -1.96
CXCL1P09341 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL1P09341 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL1P09341 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL1P09341 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL1P09341 AC006960.3-201ENST00000561845 705 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL1P09341 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC2.8□□□□□ -1.96
CXCL1P09341 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC2.8□□□□□ -1.96
CXCL1P09341 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL1P09341 AC091167.4-201ENST00000605079 184 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 AL356218.2-201ENST00000605264 187 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 AL354760.1-201ENST00000608357 643 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 MIR6862-1-201ENST00000613016 70 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 MIR6862-2-201ENST00000614755 70 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL1P09341 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.8□□□□□ -1.96
CXCL1P09341 AL732372.2-225ENST00000642124 456 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL1P09341 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CXCL1P09341 CASC19-261ENST00000641853 1638 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CXCL1P09341 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.79□□□□□ -1.96
CXCL1P09341 AP001148.1-201ENST00000624124 2359 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 SEPT7P7-201ENST00000420492 1301 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CXCL1P09341 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CXCL1P09341 Y_RNA.62-201ENST00000362840 99 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 RNA5SP97-201ENST00000365006 84 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 RNA5SP167-201ENST00000365461 116 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL1P09341 MIR320B1-201ENST00000390209 79 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CXCL1P09341 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CXCL1P09341 RPS4XP9-201ENST00000405151 780 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 RNU2-37P-201ENST00000410695 177 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 RANP4-201ENST00000413361 655 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL1P09341 RPL31P45-201ENST00000419532 356 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 SDCBPP3-201ENST00000419629 891 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC2.79□□□□□ -1.96
CXCL1P09341 AL390879.2-203ENST00000426943 1121 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CXCL1P09341 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.79□□□□□ -1.96
CXCL1P09341 RPL5P23-201ENST00000496040 868 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 OR5H3P-201ENST00000502817 919 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CXCL1P09341 OR5H4P-201ENST00000510851 923 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 NDUFA5P2-201ENST00000519723 344 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 AC245166.1-201ENST00000521012 253 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL1P09341 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC2.79□□□□□ -1.96
CXCL1P09341 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL1P09341 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL1P09341 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL1P09341 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CXCL1P09341 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL1P09341 AP005901.4-201ENST00000577336 569 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 MIR3138-201ENST00000585238 82 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.79□□□□□ -1.96
CXCL1P09341 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL1P09341 AC211433.2-201ENST00000608433 387 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 uc_338.9-201ENST00000617424 182 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 AC092159.4-201ENST00000624944 550 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 AF001550.2-201ENST00000636643 217 ntBASIC2.79□□□□□ -1.96
CXCL1P09341 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
CXCL1P09341 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CXCL1P09341 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.79□□□□□ -1.96
CXCL1P09341 MAPK10-362ENST00000641864 4484 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL1P09341 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.78□□□□□ -1.96
CXCL1P09341 GABPAP-201ENST00000419271 1356 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 ELL2P4-201ENST00000446870 1376 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL1P09341 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL1P09341 CCNB2P1-201ENST00000399411 1150 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 ZNF602P-201ENST00000405929 924 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 AC013404.1-201ENST00000413068 249 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.78□□□□□ -1.96
CXCL1P09341 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.78□□□□□ -1.96
CXCL1P09341 Z97055.1-201ENST00000419730 712 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms