Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC010476.1-201ENST00000519111 851 ntBASIC3.3□□□□□ -1.88
CD74P04233 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.3□□□□□ -1.88
CD74P04233 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.3□□□□□ -1.88
CD74P04233 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.3□□□□□ -1.88
CD74P04233 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.3□□□□□ -1.88
CD74P04233 AC006270.2-201ENST00000578523 652 ntBASIC3.3□□□□□ -1.88
CD74P04233 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CD74P04233 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.3□□□□□ -1.88
CD74P04233 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.3□□□□□ -1.88
CD74P04233 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.3□□□□□ -1.88
CD74P04233 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.3□□□□□ -1.88
CD74P04233 AC100814.1-201ENST00000606963 623 ntBASIC3.3□□□□□ -1.88
CD74P04233 AL592295.2-201ENST00000612578 206 ntBASIC3.3□□□□□ -1.88
CD74P04233 RNVU1-4-201ENST00000612985 164 ntBASIC3.3□□□□□ -1.88
CD74P04233 AC009032.1-201ENST00000617574 431 ntBASIC3.3□□□□□ -1.88
CD74P04233 OR6C71P-202ENST00000641886 1107 ntBASIC3.3□□□□□ -1.88
CD74P04233 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.3□□□□□ -1.88
CD74P04233 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.3□□□□□ -1.88
CD74P04233 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 AL133383.2-201ENST00000622958 2336 ntBASIC3.3□□□□□ -1.88
CD74P04233 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.3□□□□□ -1.88
CD74P04233 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.3□□□□□ -1.88
CD74P04233 AL353743.4-201ENST00000422653 1547 ntBASIC3.29□□□□□ -1.88
CD74P04233 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD74P04233 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
CD74P04233 DDX6P1-205ENST00000441966 1436 ntBASIC3.29□□□□□ -1.88
CD74P04233 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD74P04233 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CD74P04233 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CD74P04233 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CD74P04233 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.29□□□□□ -1.88
CD74P04233 RNU6-317P-201ENST00000384031 107 ntBASIC3.29□□□□□ -1.88
CD74P04233 RNU4-31P-201ENST00000384211 141 ntBASIC3.29□□□□□ -1.88
CD74P04233 FABP12P1-201ENST00000401911 322 ntBASIC3.29□□□□□ -1.88
CD74P04233 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.29□□□□□ -1.88
CD74P04233 AC004022.2-201ENST00000413824 193 ntBASIC3.29□□□□□ -1.88
CD74P04233 MTND2P15-201ENST00000418575 892 ntBASIC3.29□□□□□ -1.88
CD74P04233 COX6CP17-201ENST00000421389 185 ntBASIC3.29□□□□□ -1.88
CD74P04233 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.29□□□□□ -1.88
CD74P04233 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.29□□□□□ -1.88
CD74P04233 AL590623.1-201ENST00000427864 105 ntBASIC3.29□□□□□ -1.88
CD74P04233 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.29□□□□□ -1.88
CD74P04233 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.29□□□□□ -1.88
CD74P04233 RPS4XP4-201ENST00000443195 763 ntBASIC3.29□□□□□ -1.88
CD74P04233 MTCYBP21-201ENST00000443300 1113 ntBASIC3.29□□□□□ -1.88
CD74P04233 RPL21P133-201ENST00000443666 476 ntBASIC3.29□□□□□ -1.88
CD74P04233 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.29□□□□□ -1.88
CD74P04233 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.29□□□□□ -1.88
CD74P04233 AC009963.2-201ENST00000453431 138 ntBASIC3.29□□□□□ -1.88
CD74P04233 AC146507.1-201ENST00000468335 354 ntBASIC3.29□□□□□ -1.88
CD74P04233 RN7SL385P-201ENST00000468873 276 ntBASIC3.29□□□□□ -1.88
CD74P04233 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.29□□□□□ -1.88
CD74P04233 RPL7P47-201ENST00000497299 556 ntBASIC3.29□□□□□ -1.88
CD74P04233 HMGB1P3-201ENST00000502802 616 ntBASIC3.29□□□□□ -1.88
CD74P04233 FTH1P24-201ENST00000503502 462 ntBASIC3.29□□□□□ -1.88
CD74P04233 AC026784.1-201ENST00000507986 352 ntBASIC3.29□□□□□ -1.88
CD74P04233 RNU6-1004P-201ENST00000516584 111 ntBASIC3.29□□□□□ -1.88
CD74P04233 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.29□□□□□ -1.88
CD74P04233 AC008489.1-201ENST00000524271 483 ntBASIC3.29□□□□□ -1.88
CD74P04233 AP004242.1-201ENST00000533701 349 ntBASIC3.29□□□□□ -1.88
CD74P04233 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD74P04233 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.29□□□□□ -1.88
CD74P04233 MIR4715-201ENST00000584117 79 ntBASIC3.29□□□□□ -1.88
CD74P04233 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.29□□□□□ -1.88
CD74P04233 RMST_8.1-201ENST00000610287 165 ntBASIC3.29□□□□□ -1.88
CD74P04233 AL731566.2-201ENST00000618971 317 ntBASIC3.29□□□□□ -1.88
CD74P04233 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.29□□□□□ -1.88
CD74P04233 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.29□□□□□ -1.88
CD74P04233 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.29□□□□□ -1.88
CD74P04233 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CD74P04233 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD74P04233 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD74P04233 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CD74P04233 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD74P04233 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD74P04233 AL592494.2-201ENST00000425455 1548 ntBASIC3.29□□□□□ -1.88
CD74P04233 USP8P1-201ENST00000494673 3183 ntBASIC3.28□□□□□ -1.88
CD74P04233 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CD74P04233 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CD74P04233 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CD74P04233 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD74P04233 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CD74P04233 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CD74P04233 ASNSP1-204ENST00000641977 1664 ntBASIC3.28□□□□□ -1.88
CD74P04233 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.28□□□□□ -1.88
CD74P04233 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD74P04233 RNA5SP399-201ENST00000364003 117 ntBASIC3.28□□□□□ -1.88
CD74P04233 MIR184-201ENST00000384962 84 ntBASIC3.28□□□□□ -1.88
CD74P04233 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.28□□□□□ -1.88
CD74P04233 RN7SKP285-201ENST00000410137 318 ntBASIC3.28□□□□□ -1.88
CD74P04233 RNU4-25P-201ENST00000410569 230 ntBASIC3.28□□□□□ -1.88
CD74P04233 ELOCP19-201ENST00000411919 318 ntBASIC3.28□□□□□ -1.88
CD74P04233 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.28□□□□□ -1.88
CD74P04233 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.28□□□□□ -1.88
CD74P04233 EIF2S2P3-201ENST00000428356 999 ntBASIC3.28□□□□□ -1.88
CD74P04233 AC008065.1-201ENST00000428525 348 ntBASIC3.28□□□□□ -1.88
CD74P04233 RPL23AP1-201ENST00000428990 471 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms