Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 VDAC2P1-201ENST00000399358 958 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 RPS4XP8-201ENST00000402039 771 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 RN7SKP53-201ENST00000411337 315 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SPTA1P02549 NPM1P11-201ENST00000417106 855 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.22□□□□□ -1.89
SPTA1P02549 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.22□□□□□ -1.89
SPTA1P02549 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.22□□□□□ -1.89
SPTA1P02549 RNA5SP103-201ENST00000459503 118 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 AC108941.1-201ENST00000502853 530 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.22□□□□□ -1.89
SPTA1P02549 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SPTA1P02549 RNU6-579P-201ENST00000516879 102 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 AL360157.1-201ENST00000565962 87 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.22□□□□□ -1.89
SPTA1P02549 AC008759.1-201ENST00000589783 983 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 AC069209.1-201ENST00000619282 651 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.22□□□□□ -1.89
SPTA1P02549 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.22□□□□□ -1.89
SPTA1P02549 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.89
SPTA1P02549 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
SPTA1P02549 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.21□□□□□ -1.9
SPTA1P02549 RNA5SP306-201ENST00000411087 107 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 NUP35P1-201ENST00000422734 947 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 AC093698.1-201ENST00000423843 571 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.21□□□□□ -1.9
SPTA1P02549 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.21□□□□□ -1.9
SPTA1P02549 RN7SKP244-201ENST00000516513 307 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 AC007599.1-201ENST00000568688 1174 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 DEFB122-202ENST00000569013 197 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SPTA1P02549 HSPD1P11-201ENST00000508643 1702 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 AC093535.2-201ENST00000624769 2326 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SPTA1P02549 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SPTA1P02549 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SPTA1P02549 FRG1CP-201ENST00000358464 769 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 AC011742.1-201ENST00000431448 434 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 AC107083.1-201ENST00000439643 279 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 CCDC75P1-201ENST00000469247 791 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 RN7SL585P-201ENST00000470538 280 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.21□□□□□ -1.9
SPTA1P02549 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.21□□□□□ -1.9
SPTA1P02549 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
SPTA1P02549 MIR3936-201ENST00000584304 110 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 AL163642.2-201ENST00000604722 1019 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 AC018692.3-201ENST00000623929 123 ntBASIC3.21□□□□□ -1.9
SPTA1P02549 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SPTA1P02549 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SPTA1P02549 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.2□□□□□ -1.9
SPTA1P02549 RPL21P110-201ENST00000433345 446 ntBASIC3.2□□□□□ -1.9
SPTA1P02549 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.2□□□□□ -1.9
SPTA1P02549 AC006028.1-201ENST00000438379 402 ntBASIC3.2□□□□□ -1.9
SPTA1P02549 AL645931.1-201ENST00000439737 410 ntBASIC3.2□□□□□ -1.9
SPTA1P02549 AC140076.1-201ENST00000449897 361 ntBASIC3.2□□□□□ -1.9
SPTA1P02549 PHBP14-201ENST00000512887 367 ntBASIC3.2□□□□□ -1.9
SPTA1P02549 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.2□□□□□ -1.9
SPTA1P02549 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.2□□□□□ -1.9
SPTA1P02549 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.2□□□□□ -1.9
SPTA1P02549 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC3.2□□□□□ -1.9
SPTA1P02549 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC3.2□□□□□ -1.9
SPTA1P02549 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SPTA1P02549 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SPTA1P02549 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SPTA1P02549 TNPO1P3-201ENST00000436471 2662 ntBASIC3.2□□□□□ -1.9
SPTA1P02549 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SPTA1P02549 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.2□□□□□ -1.9
SPTA1P02549 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.2□□□□□ -1.9
SPTA1P02549 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SPTA1P02549 AL513175.1-201ENST00000431492 780 ntBASIC3.2□□□□□ -1.9
SPTA1P02549 S100A11P1-201ENST00000477525 312 ntBASIC3.2□□□□□ -1.9
SPTA1P02549 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.2□□□□□ -1.9
SPTA1P02549 AP000916.1-201ENST00000533869 835 ntBASIC3.2□□□□□ -1.9
SPTA1P02549 GTF3AP2-201ENST00000557014 266 ntBASIC3.2□□□□□ -1.9
SPTA1P02549 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.2□□□□□ -1.9
SPTA1P02549 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SPTA1P02549 AC007656.2-201ENST00000624902 4547 ntBASIC3.2□□□□□ -1.9
SPTA1P02549 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.19□□□□□ -1.9
SPTA1P02549 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.19□□□□□ -1.9
SPTA1P02549 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SPTA1P02549 U3.23-201ENST00000391132 200 ntBASIC3.19□□□□□ -1.9
SPTA1P02549 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.19□□□□□ -1.9
SPTA1P02549 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3.19□□□□□ -1.9
SPTA1P02549 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SPTA1P02549 NPM1P39-201ENST00000449818 867 ntBASIC3.19□□□□□ -1.9
SPTA1P02549 NECAP1P2-201ENST00000455668 727 ntBASIC3.19□□□□□ -1.9
SPTA1P02549 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SPTA1P02549 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.19□□□□□ -1.9
SPTA1P02549 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.19□□□□□ -1.9
SPTA1P02549 LSM3P2-201ENST00000551246 273 ntBASIC3.19□□□□□ -1.9
SPTA1P02549 MIR4472-2-201ENST00000582069 67 ntBASIC3.19□□□□□ -1.9
SPTA1P02549 AC084036.1-201ENST00000609190 508 ntBASIC3.19□□□□□ -1.9
SPTA1P02549 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.19□□□□□ -1.9
SPTA1P02549 Xist_exon4.1-201ENST00000615964 126 ntBASIC3.19□□□□□ -1.9
SPTA1P02549 AC127502.3-201ENST00000636170 1206 ntBASIC3.19□□□□□ -1.9
SPTA1P02549 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SPTA1P02549 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SPTA1P02549 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
SPTA1P02549 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms