Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.23□□□□□ -1.89
UPK1BO75841 OR5M14P-201ENST00000506803 618 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 RNU6-751P-201ENST00000516382 101 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1BO75841 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
UPK1BO75841 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1BO75841 AC104027.1-201ENST00000521887 300 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AC022784.5-201ENST00000522241 437 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1BO75841 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.23□□□□□ -1.89
UPK1BO75841 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1BO75841 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1BO75841 AC091516.1-201ENST00000549191 703 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1BO75841 AC090751.1-201ENST00000566966 267 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AC091042.1-201ENST00000579213 173 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1BO75841 LLPHP1-201ENST00000603571 367 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AL031320.1-201ENST00000604177 357 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AL392112.1-201ENST00000605115 829 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AC079684.1-201ENST00000621405 437 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 C2orf27A-204ENST00000623058 969 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AC006065.5-201ENST00000623427 349 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK1BO75841 SNORA17.5-201ENST00000630429 132 ntBASIC3.23□□□□□ -1.89
UPK1BO75841 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.23□□□□□ -1.89
UPK1BO75841 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.23□□□□□ -1.89
UPK1BO75841 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.23□□□□□ -1.89
UPK1BO75841 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1BO75841 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 AC007823.1-201ENST00000569932 1566 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 AL049737.1-201ENST00000413920 1403 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.22□□□□□ -1.89
UPK1BO75841 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
UPK1BO75841 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 RNA5SP305-201ENST00000362665 119 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 RNA5SP242-201ENST00000364171 118 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AL133270.1-201ENST00000402635 279 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 HMGB3P18-201ENST00000406327 590 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 HSPE1P12-201ENST00000412576 301 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.22□□□□□ -1.89
UPK1BO75841 TCEA1P2-201ENST00000420496 906 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 OR5BE1P-201ENST00000425977 939 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.22□□□□□ -1.89
UPK1BO75841 RPL12P3-201ENST00000440080 396 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 XKRY2-201ENST00000442362 1093 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.22□□□□□ -1.89
UPK1BO75841 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1BO75841 CFTRP1-201ENST00000456646 183 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 RPL7P32-201ENST00000457119 744 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1BO75841 RNU6-775P-201ENST00000459318 96 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 RN7SL98P-201ENST00000462271 300 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
UPK1BO75841 AC087385.1-201ENST00000475062 312 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 RPL21P103-201ENST00000479921 488 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1BO75841 AC008958.1-201ENST00000511047 682 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AC099522.1-202ENST00000514718 367 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 RN7SKP234-201ENST00000517173 224 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.22□□□□□ -1.89
UPK1BO75841 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.22□□□□□ -1.89
UPK1BO75841 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.22□□□□□ -1.89
UPK1BO75841 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 AC006960.3-201ENST00000561845 705 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.22□□□□□ -1.89
UPK1BO75841 AC005242.1-201ENST00000585658 438 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.22□□□□□ -1.89
UPK1BO75841 BX322635.1-201ENST00000605804 496 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AC105429.2-201ENST00000610567 517 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AC016911.1-201ENST00000613297 452 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AC110801.1-201ENST00000623590 212 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AC024023.1-201ENST00000624530 922 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1BO75841 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.22□□□□□ -1.89
UPK1BO75841 OR5BE1P-202ENST00000641168 1176 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK1BO75841 NMD3P1-201ENST00000439704 1488 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 AP002001.2-201ENST00000529025 1469 ntBASIC3.22□□□□□ -1.89
UPK1BO75841 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
UPK1BO75841 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.21□□□□□ -1.9
UPK1BO75841 AC007496.3-201ENST00000624987 3443 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
UPK1BO75841 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK1BO75841 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK1BO75841 MIR323A-201ENST00000362199 86 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK1BO75841 SNORA70F-201ENST00000384142 135 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms