Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.47□□□□□ -1.85
SGCEO43556 AIMP1P1-201ENST00000418670 937 ntBASIC3.47□□□□□ -1.85
SGCEO43556 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.47□□□□□ -1.85
SGCEO43556 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.47□□□□□ -1.85
SGCEO43556 KCTD9P3-201ENST00000434597 1169 ntBASIC3.47□□□□□ -1.85
SGCEO43556 AC105402.2-201ENST00000438503 358 ntBASIC3.47□□□□□ -1.85
SGCEO43556 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.47□□□□□ -1.85
SGCEO43556 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.47□□□□□ -1.85
SGCEO43556 RPS11P1-201ENST00000451072 473 ntBASIC3.47□□□□□ -1.85
SGCEO43556 RPS7P7-201ENST00000463499 571 ntBASIC3.47□□□□□ -1.85
SGCEO43556 AC110792.1-201ENST00000491826 472 ntBASIC3.47□□□□□ -1.85
SGCEO43556 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.47□□□□□ -1.85
SGCEO43556 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.47□□□□□ -1.85
SGCEO43556 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.47□□□□□ -1.85
SGCEO43556 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.47□□□□□ -1.85
SGCEO43556 AL049870.4-201ENST00000555741 486 ntBASIC3.47□□□□□ -1.85
SGCEO43556 AC009303.3-201ENST00000591103 736 ntBASIC3.47□□□□□ -1.85
SGCEO43556 MRPS35P3-201ENST00000603189 709 ntBASIC3.47□□□□□ -1.85
SGCEO43556 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.47□□□□□ -1.85
SGCEO43556 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SGCEO43556 AC112484.5-201ENST00000624189 228 ntBASIC3.47□□□□□ -1.85
SGCEO43556 AC244205.2-202ENST00000635781 342 ntBASIC3.47□□□□□ -1.85
SGCEO43556 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SGCEO43556 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SGCEO43556 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SGCEO43556 BDP1P-201ENST00000582658 1990 ntBASIC3.47□□□□□ -1.85
SGCEO43556 AP002001.2-201ENST00000529025 1469 ntBASIC3.47□□□□□ -1.85
SGCEO43556 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SGCEO43556 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.46□□□□□ -1.86
SGCEO43556 RIOK3P1-201ENST00000418778 1528 ntBASIC3.46□□□□□ -1.86
SGCEO43556 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.46□□□□□ -1.86
SGCEO43556 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.46□□□□□ -1.86
SGCEO43556 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SGCEO43556 RNU4-31P-201ENST00000384211 141 ntBASIC3.46□□□□□ -1.86
SGCEO43556 MIR153-1-201ENST00000384914 90 ntBASIC3.46□□□□□ -1.86
SGCEO43556 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.46□□□□□ -1.86
SGCEO43556 RNU4-6P-201ENST00000410804 122 ntBASIC3.46□□□□□ -1.86
SGCEO43556 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.46□□□□□ -1.86
SGCEO43556 OR8G2P-201ENST00000412796 908 ntBASIC3.46□□□□□ -1.86
SGCEO43556 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SGCEO43556 AL356095.1-201ENST00000417217 199 ntBASIC3.46□□□□□ -1.86
SGCEO43556 NPM1P34-201ENST00000428821 893 ntBASIC3.46□□□□□ -1.86
SGCEO43556 AC023347.2-201ENST00000433994 462 ntBASIC3.46□□□□□ -1.86
SGCEO43556 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.46□□□□□ -1.86
SGCEO43556 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.46□□□□□ -1.86
SGCEO43556 TPT1P12-201ENST00000448968 492 ntBASIC3.46□□□□□ -1.86
SGCEO43556 AC004801.2-202ENST00000463559 283 ntBASIC3.46□□□□□ -1.86
SGCEO43556 CEACAMP10-202ENST00000495431 496 ntBASIC3.46□□□□□ -1.86
SGCEO43556 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SGCEO43556 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.46□□□□□ -1.86
SGCEO43556 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.46□□□□□ -1.86
SGCEO43556 AC147055.1-201ENST00000509261 750 ntBASIC3.46□□□□□ -1.86
SGCEO43556 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.46□□□□□ -1.86
SGCEO43556 AC026726.1-201ENST00000512859 601 ntBASIC3.46□□□□□ -1.86
SGCEO43556 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.46□□□□□ -1.86
SGCEO43556 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.46□□□□□ -1.86
SGCEO43556 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.46□□□□□ -1.86
SGCEO43556 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.46□□□□□ -1.86
SGCEO43556 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
SGCEO43556 AL389895.1-201ENST00000554127 252 ntBASIC3.46□□□□□ -1.86
SGCEO43556 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.46□□□□□ -1.86
SGCEO43556 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.46□□□□□ -1.86
SGCEO43556 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.46□□□□□ -1.86
SGCEO43556 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.46□□□□□ -1.86
SGCEO43556 AC006254.3-201ENST00000603353 884 ntBASIC3.46□□□□□ -1.86
SGCEO43556 AL591034.3-201ENST00000605511 685 ntBASIC3.46□□□□□ -1.86
SGCEO43556 AC012557.1-201ENST00000607115 611 ntBASIC3.46□□□□□ -1.86
SGCEO43556 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.46□□□□□ -1.86
SGCEO43556 MIR6867-201ENST00000610636 67 ntBASIC3.46□□□□□ -1.86
SGCEO43556 MIR378J-201ENST00000611988 109 ntBASIC3.46□□□□□ -1.86
SGCEO43556 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SGCEO43556 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SGCEO43556 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SGCEO43556 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.46□□□□□ -1.86
SGCEO43556 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.46□□□□□ -1.86
SGCEO43556 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SGCEO43556 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.46□□□□□ -1.86
SGCEO43556 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.46□□□□□ -1.86
SGCEO43556 RLIMP1-201ENST00000339626 1680 ntBASIC3.46□□□□□ -1.86
SGCEO43556 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SGCEO43556 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SGCEO43556 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SGCEO43556 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SGCEO43556 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SGCEO43556 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.45□□□□□ -1.86
SGCEO43556 ZNF826P-207ENST00000622273 1910 ntBASIC3.45□□□□□ -1.86
SGCEO43556 RNU1-18P-201ENST00000363062 164 ntBASIC3.45□□□□□ -1.86
SGCEO43556 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SGCEO43556 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
SGCEO43556 AL590290.1-201ENST00000405336 380 ntBASIC3.45□□□□□ -1.86
SGCEO43556 RPL21P65-201ENST00000406094 466 ntBASIC3.45□□□□□ -1.86
SGCEO43556 COX6CP17-201ENST00000421389 185 ntBASIC3.45□□□□□ -1.86
SGCEO43556 AC008065.1-201ENST00000428525 348 ntBASIC3.45□□□□□ -1.86
SGCEO43556 AL606490.7-201ENST00000433136 191 ntBASIC3.45□□□□□ -1.86
SGCEO43556 RANP8-201ENST00000444720 713 ntBASIC3.45□□□□□ -1.86
SGCEO43556 AC114755.5-201ENST00000447760 831 ntBASIC3.45□□□□□ -1.86
SGCEO43556 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.45□□□□□ -1.86
SGCEO43556 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.45□□□□□ -1.86
SGCEO43556 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.45□□□□□ -1.86
SGCEO43556 RNA5SP179-201ENST00000517284 121 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms