Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF3O43395 AC068722.2-201ENST00000618734 544 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 AC015871.5-202ENST00000623252 701 ntBASIC5.4□□□□□ -1.54
PRPF3O43395 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
PRPF3O43395 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
PRPF3O43395 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.4□□□□□ -1.55
PRPF3O43395 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
PRPF3O43395 AC135352.1-201ENST00000506173 1418 ntBASIC5.4□□□□□ -1.55
PRPF3O43395 AL136164.3-201ENST00000624429 3978 ntBASIC5.4□□□□□ -1.55
PRPF3O43395 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF3O43395 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PRPF3O43395 AL672167.1-205ENST00000641112 3080 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 AC083843.3-201ENST00000623679 2186 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF3O43395 AC083843.2-201ENST00000568248 6253 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PRPF3O43395 RNA5SP391-201ENST00000363456 119 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF3O43395 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PRPF3O43395 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.39□□□□□ -1.55
PRPF3O43395 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.39□□□□□ -1.55
PRPF3O43395 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF3O43395 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF3O43395 NUP35P2-201ENST00000416748 943 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF3O43395 AC005345.1-201ENST00000431868 217 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 AL359265.2-201ENST00000434367 631 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 AC006466.1-201ENST00000438721 289 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 MTND2P20-201ENST00000440805 661 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF3O43395 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF3O43395 OR6K5P-201ENST00000447050 945 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 AL445433.1-201ENST00000457507 257 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PRPF3O43395 AC010301.1-201ENST00000473936 355 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.39□□□□□ -1.55
PRPF3O43395 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF3O43395 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF3O43395 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF3O43395 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF3O43395 LSM6P2-201ENST00000552208 177 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF3O43395 AC068446.3-201ENST00000555285 382 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF3O43395 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF3O43395 EIF5A2P1-201ENST00000564027 460 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF3O43395 AC069304.3-201ENST00000603938 1084 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 AC097065.2-201ENST00000608159 533 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 Mico1.1-201ENST00000611698 204 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 AC131159.1-201ENST00000621854 213 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF3O43395 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF3O43395 AF001550.2-201ENST00000636643 217 ntBASIC5.39□□□□□ -1.55
PRPF3O43395 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF3O43395 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF3O43395 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.38□□□□□ -1.55
PRPF3O43395 AC125257.1-201ENST00000560400 2930 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PRPF3O43395 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF3O43395 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
PRPF3O43395 RNU6-216P-201ENST00000363282 104 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF3O43395 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF3O43395 RNA5SP296-201ENST00000410523 111 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.38□□□□□ -1.55
PRPF3O43395 TIMM9P2-201ENST00000419324 266 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 AC062016.2-201ENST00000420950 676 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.38□□□□□ -1.55
PRPF3O43395 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF3O43395 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF3O43395 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF3O43395 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF3O43395 MTCO1P48-201ENST00000448024 1096 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 HMGB3P21-201ENST00000452483 547 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
PRPF3O43395 AC006967.1-201ENST00000467608 589 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 AC112206.1-201ENST00000468416 477 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF3O43395 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF3O43395 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF3O43395 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF3O43395 MTND2P26-201ENST00000528255 1029 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF3O43395 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF3O43395 AC124068.1-201ENST00000563131 678 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 MTCYBP28-201ENST00000566728 1132 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 AC138915.2-201ENST00000569776 97 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF3O43395 AC209154.1-201ENST00000582156 337 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 COX6CP4-201ENST00000605798 228 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 AC022079.1-201ENST00000621546 602 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF3O43395 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.38□□□□□ -1.55
PRPF3O43395 CU459211.1-201ENST00000635667 749 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
PRPF3O43395 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF3O43395 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF3O43395 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms