Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CEP290O15078 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.72□□□□□ -1.81
CEP290O15078 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CEP290O15078 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
CEP290O15078 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
CEP290O15078 RSL24D1P4-201ENST00000400938 484 ntBASIC3.72□□□□□ -1.81
CEP290O15078 NECAP1P2-201ENST00000455668 727 ntBASIC3.72□□□□□ -1.81
CEP290O15078 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.72□□□□□ -1.81
CEP290O15078 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.72□□□□□ -1.81
CEP290O15078 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.72□□□□□ -1.81
CEP290O15078 RNU6-579P-201ENST00000516879 102 ntBASIC3.72□□□□□ -1.81
CEP290O15078 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CEP290O15078 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC3.72□□□□□ -1.81
CEP290O15078 SLC25A36P1-201ENST00000590111 465 ntBASIC3.72□□□□□ -1.81
CEP290O15078 AC105227.2-201ENST00000615075 605 ntBASIC3.72□□□□□ -1.81
CEP290O15078 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.72□□□□□ -1.81
CEP290O15078 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.72□□□□□ -1.81
CEP290O15078 AC009313.2-201ENST00000417893 1941 ntBASIC3.72□□□□□ -1.81
CEP290O15078 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CEP290O15078 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
CEP290O15078 Z95327.2-201ENST00000414579 1873 ntBASIC3.72□□□□□ -1.81
CEP290O15078 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CEP290O15078 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CEP290O15078 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CEP290O15078 Y_RNA.238-201ENST00000364441 102 ntBASIC3.71□□□□□ -1.81
CEP290O15078 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
CEP290O15078 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.71□□□□□ -1.81
CEP290O15078 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.71□□□□□ -1.81
CEP290O15078 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.71□□□□□ -1.81
CEP290O15078 RPS17P11-201ENST00000474297 293 ntBASIC3.71□□□□□ -1.81
CEP290O15078 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CEP290O15078 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.71□□□□□ -1.81
CEP290O15078 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.71□□□□□ -1.81
CEP290O15078 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.71□□□□□ -1.81
CEP290O15078 VN1R90P-201ENST00000595717 726 ntBASIC3.71□□□□□ -1.81
CEP290O15078 AC006946.3-201ENST00000609791 756 ntBASIC3.71□□□□□ -1.81
CEP290O15078 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.71□□□□□ -1.81
CEP290O15078 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.71□□□□□ -1.81
CEP290O15078 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CEP290O15078 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CEP290O15078 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CEP290O15078 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CEP290O15078 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CEP290O15078 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CEP290O15078 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.71□□□□□ -1.82
CEP290O15078 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC3.71□□□□□ -1.82
CEP290O15078 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CEP290O15078 SDCBPP2-201ENST00000424643 885 ntBASIC3.71□□□□□ -1.82
CEP290O15078 ATP5C1P1-201ENST00000441945 895 ntBASIC3.71□□□□□ -1.82
CEP290O15078 NPM1P39-201ENST00000449818 867 ntBASIC3.71□□□□□ -1.82
CEP290O15078 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.71□□□□□ -1.82
CEP290O15078 TRAV15-201ENST00000556680 249 ntBASIC3.71□□□□□ -1.82
CEP290O15078 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.71□□□□□ -1.82
CEP290O15078 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.71□□□□□ -1.82
CEP290O15078 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CEP290O15078 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CEP290O15078 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
CEP290O15078 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CEP290O15078 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CEP290O15078 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.7□□□□□ -1.82
CEP290O15078 RPL35AP12-201ENST00000425362 338 ntBASIC3.7□□□□□ -1.82
CEP290O15078 RPS20P1-201ENST00000434853 354 ntBASIC3.7□□□□□ -1.82
CEP290O15078 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CEP290O15078 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.7□□□□□ -1.82
CEP290O15078 AC023161.2-201ENST00000551218 780 ntBASIC3.7□□□□□ -1.82
CEP290O15078 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.7□□□□□ -1.82
CEP290O15078 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.7□□□□□ -1.82
CEP290O15078 RNA5SP439-201ENST00000617595 124 ntBASIC3.7□□□□□ -1.82
CEP290O15078 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.7□□□□□ -1.82
CEP290O15078 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CEP290O15078 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CEP290O15078 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
CEP290O15078 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CEP290O15078 SAGE2P-201ENST00000420011 2126 ntBASIC3.7□□□□□ -1.82
CEP290O15078 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CEP290O15078 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.7□□□□□ -1.82
CEP290O15078 FAM133CP-201ENST00000332869 704 ntBASIC3.7□□□□□ -1.82
CEP290O15078 AC062016.1-201ENST00000355719 319 ntBASIC3.7□□□□□ -1.82
CEP290O15078 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.7□□□□□ -1.82
CEP290O15078 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.7□□□□□ -1.82
CEP290O15078 PSMA2P1-201ENST00000526365 646 ntBASIC3.7□□□□□ -1.82
CEP290O15078 AL121766.1-201ENST00000547436 487 ntBASIC3.7□□□□□ -1.82
CEP290O15078 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.7□□□□□ -1.82
CEP290O15078 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CEP290O15078 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.7□□□□□ -1.82
CEP290O15078 AC092435.4-201ENST00000623012 4159 ntBASIC3.69□□□□□ -1.82
CEP290O15078 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.69□□□□□ -1.82
CEP290O15078 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.69□□□□□ -1.82
CEP290O15078 AL591473.1-201ENST00000464297 313 ntBASIC3.69□□□□□ -1.82
CEP290O15078 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CEP290O15078 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.69□□□□□ -1.82
CEP290O15078 AC245100.7-201ENST00000609678 442 ntBASIC3.69□□□□□ -1.82
CEP290O15078 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.69□□□□□ -1.82
CEP290O15078 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.69□□□□□ -1.82
CEP290O15078 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.69□□□□□ -1.82
CEP290O15078 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CEP290O15078 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.69□□□□□ -1.82
CEP290O15078 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CEP290O15078 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CEP290O15078 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms