Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM38O00635 AL137845.2-201ENST00000444292 988 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 OR52J1P-201ENST00000450596 932 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 RFC5P1-201ENST00000454419 874 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM38O00635 AP000942.1-201ENST00000463969 747 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.97□□□□□ -1.61
TRIM38O00635 MTND2P14-201ENST00000482139 351 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM38O00635 AC104971.1-201ENST00000495117 578 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 MRPS33P2-201ENST00000507850 322 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 RN7SKP46-201ENST00000515942 234 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM38O00635 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM38O00635 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM38O00635 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.97□□□□□ -1.61
TRIM38O00635 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.97□□□□□ -1.61
TRIM38O00635 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM38O00635 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM38O00635 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM38O00635 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRIM38O00635 AC093519.1-201ENST00000566109 298 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 UBE2FP2-201ENST00000566646 462 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM38O00635 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM38O00635 BNIP3P26-201ENST00000600827 554 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AC005191.1-201ENST00000603950 358 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM38O00635 AC104073.3-201ENST00000610942 955 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 MIR8069-1-201ENST00000616627 86 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 MIR8069-2-201ENST00000621412 86 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 MIR7641-1-201ENST00000627518 61 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AC084035.1-201ENST00000634543 607 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM38O00635 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM38O00635 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM38O00635 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM38O00635 DCAF13P3-201ENST00000561147 1334 ntBASIC4.97□□□□□ -1.61
TRIM38O00635 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
TRIM38O00635 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 ZNF876P-202ENST00000398732 1485 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM38O00635 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 ASNSP1-201ENST00000518311 1939 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 AC016716.1-201ENST00000265882 708 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM38O00635 AC011155.1-201ENST00000316512 456 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 RNU6-1066P-201ENST00000363573 105 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 SUGT1P1-201ENST00000379514 476 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 RNU6-1300P-201ENST00000391046 108 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 RAB28P1-201ENST00000411517 641 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 AC004022.2-201ENST00000413824 193 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM38O00635 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM38O00635 RPL7P44-201ENST00000424827 742 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM38O00635 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 RPS26P56-201ENST00000444468 240 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 COX6CP18-201ENST00000448769 222 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM38O00635 AL356981.1-201ENST00000454879 684 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 MTND4LP3-201ENST00000468320 276 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 RN7SL319P-201ENST00000480656 221 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 AC010350.1-201ENST00000504908 231 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM38O00635 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM38O00635 AC117532.1-201ENST00000514638 323 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 RAB9BP1-201ENST00000519581 626 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM38O00635 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM38O00635 ARL2BPP5-201ENST00000523141 481 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 OR5AN2P-201ENST00000534535 896 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 NMNAT1P1-201ENST00000554095 876 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.96□□□□□ -1.62
TRIM38O00635 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM38O00635 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.96□□□□□ -1.62
TRIM38O00635 AP005432.2-201ENST00000608162 586 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 AC069234.5-201ENST00000611056 416 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 AC092106.3-201ENST00000611308 722 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 AL731566.2-201ENST00000618971 317 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 AC026634.1-201ENST00000634369 198 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms