Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC092421.1-201ENST00000448148 418 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 SNORD127-201ENST00000458892 86 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 AC103987.1-201ENST00000473394 348 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 GZMAP1-201ENST00000503054 631 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 SNX18P23-201ENST00000510867 677 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 RNU6-1023P-201ENST00000516137 106 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 SCARNA18.2-201ENST00000516882 84 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 MIR1273F-201ENST00000580581 99 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 MIR3128-201ENST00000581957 66 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 MIR4428-201ENST00000584884 73 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 AL590032.1-201ENST00000604920 252 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RCCD1A6NED2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RCCD1A6NED2 AC010615.1-201ENST00000594254 1764 ntBASIC7.09□□□□□ -1.27
RCCD1A6NED2 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RCCD1A6NED2 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RCCD1A6NED2 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RCCD1A6NED2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RCCD1A6NED2 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RCCD1A6NED2 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.09□□□□□ -1.27
RCCD1A6NED2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
RCCD1A6NED2 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.09□□□□□ -1.28
RCCD1A6NED2 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.28
RCCD1A6NED2 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RCCD1A6NED2 TPTE2P4-201ENST00000258589 1605 ntBASIC7.09□□□□□ -1.28
RCCD1A6NED2 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RCCD1A6NED2 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RCCD1A6NED2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RCCD1A6NED2 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RCCD1A6NED2 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 AL117339.4-201ENST00000608335 7063 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RCCD1A6NED2 Y_RNA.39-201ENST00000362620 98 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 SNORA20.1-201ENST00000364790 130 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 RNU1-46P-201ENST00000384425 164 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 RNA5SP280-201ENST00000411230 115 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 AL663061.1-201ENST00000416625 580 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 GRPEL2P2-201ENST00000421856 670 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 HMGB3P21-201ENST00000452483 547 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 RN7SL149P-201ENST00000465197 281 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 AC104806.1-201ENST00000508720 308 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 DCAF13P2-201ENST00000514188 555 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 NDUFA3P2-201ENST00000531434 232 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 AC091304.5-201ENST00000568969 158 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 AL031320.1-201ENST00000604177 357 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RCCD1A6NED2 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RCCD1A6NED2 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RCCD1A6NED2 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RCCD1A6NED2 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RCCD1A6NED2 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RCCD1A6NED2 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 BDP1P-201ENST00000582658 1990 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RCCD1A6NED2 AC010624.4-201ENST00000597606 1351 ntBASIC7.08□□□□□ -1.28
RCCD1A6NED2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.07□□□□□ -1.28
RCCD1A6NED2 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RCCD1A6NED2 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RCCD1A6NED2 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
RCCD1A6NED2 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RCCD1A6NED2 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RCCD1A6NED2 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.07□□□□□ -1.28
RCCD1A6NED2 AL731566.1-201ENST00000620490 1937 ntBASIC7.07□□□□□ -1.28
RCCD1A6NED2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
RCCD1A6NED2 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RCCD1A6NED2 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RCCD1A6NED2 AC062022.1-201ENST00000451026 1684 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms