Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 MIR4697-201ENST00000582977 78 ntBASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 AL137849.1-201ENST00000604767 169 ntBASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 AL354760.1-201ENST00000608357 643 ntBASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 AL589935.2-201ENST00000616471 1231 ntBASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 AC105105.5-201ENST00000622635 1294 ntBASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 SEPT7P7-201ENST00000420492 1301 ntBASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DRB4X5D2U9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 RNA5SP283-201ENST00000365604 119 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 RNU6-213P-201ENST00000384051 104 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC069218.2-201ENST00000411665 344 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 RPS15AP6-201ENST00000420703 385 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC093084.1-201ENST00000424233 687 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 USP9YP31-201ENST00000431405 881 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 CFTRP1-201ENST00000456646 183 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 OR9M1P-201ENST00000459641 921 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 RPL6P9-201ENST00000466502 859 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 CYCSP20-201ENST00000473154 315 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC084198.1-201ENST00000477747 402 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AL049830.2-201ENST00000480072 201 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 VN1R105P-201ENST00000486595 910 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 PHBP14-201ENST00000512887 367 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC108471.1-201ENST00000513977 287 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 RN7SKP209-201ENST00000516888 304 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 OR8R1P-201ENST00000543943 764 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 CYCSP30-201ENST00000546447 172 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC105036.1-201ENST00000566222 271 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AP001180.3-201ENST00000582221 145 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC053481.4-201ENST00000583164 216 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC007687.1-201ENST00000602704 304 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AL390816.3-201ENST00000604527 1066 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 BRDTP1-201ENST00000605735 677 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 RNA5SP196-201ENST00000625967 102 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 U6.98-201ENST00000637157 84 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 OR6C71P-202ENST00000641886 1107 ntBASIC2.84□□□□□ -1.95
HLA-DRB4X5D2U9 ZNF542P-204ENST00000482727 1305 ntBASIC2.84□□□□□ -1.96
HLA-DRB4X5D2U9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DRB4X5D2U9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DRB4X5D2U9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DRB4X5D2U9 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DRB4X5D2U9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 RAD1P1-201ENST00000231383 813 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 SNORA57.3-201ENST00000411095 141 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC114814.2-201ENST00000419195 485 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC048351.1-201ENST00000420064 602 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AL049610.1-201ENST00000423374 372 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 RPL30P3-201ENST00000424262 333 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AL390879.2-203ENST00000426943 1121 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 Z74696.2-201ENST00000436514 498 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 SETD6P1-201ENST00000444575 317 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 NUTF2P7-201ENST00000453086 375 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 SNORD108-201ENST00000459332 71 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 RN7SL330P-201ENST00000469709 307 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC078785.3-201ENST00000476607 425 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 AC092451.1-201ENST00000480211 153 ntBASIC2.83□□□□□ -1.96
HLA-DRB4X5D2U9 RPL23AP44-201ENST00000482216 473 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms