Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
KCNIP3Q9Y2W7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 RNA5SP507-201ENST00000363603 121 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 SNORA51.8-201ENST00000384234 132 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 EI24P2-201ENST00000397776 1076 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 RN7SKP106-201ENST00000410832 272 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC119751.6-201ENST00000416712 186 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 RPS15AP40-201ENST00000419621 391 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC007394.1-201ENST00000421941 531 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 RPL23AP46-201ENST00000438548 490 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 DNAJC19P1-201ENST00000455312 319 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 CFTRP1-201ENST00000456646 183 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC015724.1-201ENST00000478577 156 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 RPL31P61-201ENST00000496160 376 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC106872.4-201ENST00000510050 523 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 Vault.1-201ENST00000516474 102 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 RN7SKP277-201ENST00000516895 283 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 MTND5P21-201ENST00000531961 522 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AP000916.1-201ENST00000533869 835 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 SERPINE4P-201ENST00000554978 281 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 MIR3186-201ENST00000577404 85 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC245100.7-201ENST00000609678 442 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC116651.1-201ENST00000609724 556 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 MIR6768-201ENST00000610734 72 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC097372.4-201ENST00000625025 466 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AC244205.2-202ENST00000635781 342 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AL590396.2-201ENST00000636511 1041 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 NCAPGP1-201ENST00000505112 1814 ntBASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
KCNIP3Q9Y2W7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 MTND4P8-201ENST00000514997 1362 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 OR5P1P-201ENST00000299512 925 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 OR11H4-201ENST00000315409 1082 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 MIR1251-201ENST00000408552 70 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AL732292.1-201ENST00000426692 226 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AL390879.2-203ENST00000426943 1121 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC011998.1-201ENST00000433403 117 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AL590762.3-201ENST00000436372 640 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC083863.1-201ENST00000438811 231 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC073648.4-201ENST00000442655 781 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 MTND1P33-201ENST00000446251 917 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC233982.1-201ENST00000451247 436 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 RN7SL330P-201ENST00000469709 307 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 RN7SL738P-201ENST00000470264 297 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 CYCSP20-201ENST00000473154 315 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC104108.1-201ENST00000509930 412 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 RNA5SP34-201ENST00000516887 130 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 IGLV2-28-201ENST00000520681 304 ntBASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
KCNIP3Q9Y2W7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms