Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU2-9P-201ENST00000410194 145 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 MTND4LP17-201ENST00000414607 293 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 SLC35E1P1-201ENST00000419313 864 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 RPL36AP53-201ENST00000432891 316 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 RNU7-136P-201ENST00000458819 69 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 RPL35AP28-201ENST00000459730 331 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 RNU6-1170P-201ENST00000515974 106 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AC022616.6-201ENST00000520479 119 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AC104237.2-201ENST00000612456 443 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AL021918.2-201ENST00000613415 194 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AL031658.2-201ENST00000616850 651 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AC233309.1-201ENST00000619522 751 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AC090617.10-201ENST00000624308 134 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AC097461.1-201ENST00000568928 2821 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AC013488.1-201ENST00000526618 1838 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 GTF2IP4-201ENST00000453092 2054 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 NBPF8-201ENST00000583271 5330 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 MTND5P16-201ENST00000460269 1703 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 Y_RNA.128-201ENST00000363391 112 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 RNU6-1151P-201ENST00000384684 107 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 RSU1P2-202ENST00000437884 485 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC016691.1-201ENST00000441321 413 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AL136380.1-201ENST00000447970 162 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 RPL23AP71-201ENST00000470966 469 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 OR5B19P-201ENST00000531766 928 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 HMGB1P42-201ENST00000532126 553 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 Z84480.1-201ENST00000605131 311 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC141002.1-201ENST00000607025 279 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 AC021106.3-201ENST00000623925 531 ntBASIC7.27□□□□□ -1.25
ZC3H4Q9UPT8 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 LARP1BP1-201ENST00000506036 1359 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AL136531.3-201ENST00000624378 3658 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 Y_RNA.259-201ENST00000364619 101 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 Y_RNA.579-201ENST00000390939 94 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 MTND3P8-201ENST00000412909 339 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 MTCYBP8-201ENST00000422855 651 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AC018630.2-202ENST00000422992 927 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AC113412.1-201ENST00000425840 504 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 RPS12P17-201ENST00000438591 377 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AL390119.1-201ENST00000440329 312 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 HIGD1AP8-201ENST00000453927 274 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 RPSAP50-201ENST00000481955 852 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 NPM1P41-201ENST00000512920 831 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AC112206.3-201ENST00000514578 389 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 COX6B1P6-201ENST00000522347 255 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AF279873.1-201ENST00000523393 313 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms