Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-328P-201ENST00000390887 106 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AC105402.1-201ENST00000413336 545 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AL691447.1-201ENST00000419456 387 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 RPS24P8-201ENST00000431490 402 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AC012170.1-201ENST00000495139 359 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 FTH1P24-201ENST00000503502 462 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AC021146.1-201ENST00000511202 716 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 MRPL49P2-201ENST00000521066 465 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 OR5AP1P-201ENST00000529730 940 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 MIR4738-201ENST00000579134 87 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AL354760.1-201ENST00000608357 643 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AC116651.1-201ENST00000609724 556 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 MIR6867-201ENST00000610636 67 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AL391597.1-201ENST00000618707 694 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 MIR6730-201ENST00000622213 67 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 AC020978.9-201ENST00000624380 1141 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 SAGE2P-201ENST00000420011 2126 ntBASIC3.55□□□□□ -1.84
VAPAQ9P0L0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VAPAQ9P0L0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 RNA5SP97-201ENST00000365006 84 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 RPL18P10-201ENST00000425606 538 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AL031736.2-201ENST00000426573 787 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 MTCO1P52-201ENST00000433928 531 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AC006480.1-201ENST00000449887 378 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 IGKV2-23-201ENST00000518729 323 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AC022695.1-201ENST00000522089 237 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 OR4A2P-201ENST00000527276 913 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AC023158.1-201ENST00000561632 1025 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AC006960.3-201ENST00000561845 705 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AC069304.3-201ENST00000603938 1084 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AC135803.1-201ENST00000608748 565 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 AC073342.3-201ENST00000624211 193 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 CEP170P1-201ENST00000502249 4587 ntBASIC3.54□□□□□ -1.84
VAPAQ9P0L0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VAPAQ9P0L0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 ASNSP1-204ENST00000641977 1664 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 RNU4-23P-201ENST00000362839 140 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 RNU1-32P-201ENST00000363937 159 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 SOD2P1-201ENST00000396543 562 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 RPL21P65-201ENST00000406094 466 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AMZ2P2-201ENST00000406819 1057 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AC004022.2-201ENST00000413824 193 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AC004987.3-201ENST00000413879 771 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AC127526.1-201ENST00000417526 366 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 MTND2P15-201ENST00000418575 892 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AC092832.1-201ENST00000422934 400 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AL606490.7-201ENST00000433136 191 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 NPM1P17-201ENST00000479221 602 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 RPS3AP50-201ENST00000487064 803 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AP001086.1-201ENST00000494882 321 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 TRAV31-201ENST00000502780 342 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 FABP5P6-201ENST00000510588 409 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 SNORA31.9-201ENST00000516429 84 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AC034205.1-201ENST00000520621 638 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms