Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 TPMTP2-201ENST00000414372 726 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 NME1P1-201ENST00000420914 382 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC130360.1-201ENST00000425489 1117 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC104837.2-201ENST00000427236 424 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC010881.1-201ENST00000433830 235 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC016691.1-201ENST00000441321 413 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC073909.1-201ENST00000447112 999 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 RPL31P11-202ENST00000454082 372 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSU72Q9NP77 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 SNORA70.11-201ENST00000515987 138 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 SNORA19.2-201ENST00000516013 114 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 SNORA70.13-201ENST00000516116 138 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 SNORA40.12-201ENST00000516329 111 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 IGLVIV-64-201ENST00000518581 301 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 TRMT10BP1-201ENST00000519377 943 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC130365.2-201ENST00000525882 1201 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 SULT1C2P1-202ENST00000562418 459 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC007151.1-201ENST00000572774 483 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC090312.1-201ENST00000580637 348 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 MIR7853-201ENST00000584820 132 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC243960.4-201ENST00000600532 288 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC010632.3-201ENST00000611377 369 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 AL603758.1-201ENST00000618654 241 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSU72Q9NP77 CDRT1-208ENST00000630868 794 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 TPTEP1-208ENST00000636884 213 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 CASC19-284ENST00000642142 1868 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 MTND5P3-201ENST00000438536 1800 ntBASIC5.78□□□□□ -1.48
SSU72Q9NP77 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSU72Q9NP77 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSU72Q9NP77 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSU72Q9NP77 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSU72Q9NP77 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SSU72Q9NP77 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSU72Q9NP77 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.77□□□□□ -1.48
SSU72Q9NP77 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSU72Q9NP77 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSU72Q9NP77 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 RPL7P26-201ENST00000333817 754 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 U3.7-201ENST00000363668 216 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 SNORA63C-201ENST00000364578 129 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 Y_RNA.474-201ENST00000384341 102 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 SNORA75.4-201ENST00000391278 119 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 AL162578.1-201ENST00000406202 378 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC078974.1-201ENST00000411597 223 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 SNRPFP1-201ENST00000414761 252 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC017078.1-201ENST00000416146 368 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC107953.1-201ENST00000522216 297 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 COX6CP8-201ENST00000522620 226 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC009117.1-201ENST00000563948 554 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSU72Q9NP77 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 LARP7P2-201ENST00000575306 125 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC036176.3-201ENST00000602456 418 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 SMIM12P1-201ENST00000603004 274 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC113139.1-201ENST00000605049 239 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 Z98200.1-201ENST00000607298 470 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 DISC2.1-201ENST00000612827 205 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC233309.1-201ENST00000619522 751 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 RMST_7.1-201ENST00000621935 268 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
SSU72Q9NP77 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSU72Q9NP77 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSU72Q9NP77 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSU72Q9NP77 AC012254.3-201ENST00000591183 2117 ntBASIC5.77□□□□□ -1.49
SSU72Q9NP77 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.76□□□□□ -1.49
SSU72Q9NP77 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms