Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 RNU6-444P-201ENST00000383988 108 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 SNORA51.6-201ENST00000384151 125 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 RNU6-790P-201ENST00000384479 105 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 RNU6-102P-201ENST00000384485 104 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 RPS4XP7-201ENST00000406274 780 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 U3.42-201ENST00000408746 214 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 MTND3P9-201ENST00000429526 346 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 Y_RNA.679-201ENST00000516416 91 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 MIR3137-201ENST00000577367 75 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 5S_rRNA.20-201ENST00000612104 118 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 AC125603.4-201ENST00000621942 2699 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SCAF1Q9H7N4 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SCAF1Q9H7N4 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC11.02□□□□□ -0.64
SCAF1Q9H7N4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SCAF1Q9H7N4 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SCAF1Q9H7N4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SCAF1Q9H7N4 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 RNU1-85P-201ENST00000364127 164 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 RNU6-715P-201ENST00000365204 103 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 SNORD116-14-201ENST00000383894 92 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 SNORD116-17-201ENST00000383929 92 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 SNORD116-15-201ENST00000384445 92 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 SNORD116-20-201ENST00000384529 92 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 SNORD116-19-201ENST00000384729 92 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 PDCL3P5-201ENST00000398028 722 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 DPPA2P3-201ENST00000411853 655 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 AC007098.1-201ENST00000420122 367 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 AL590399.2-201ENST00000427536 309 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 RNU7-27P-201ENST00000459281 62 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 AP000926.1-201ENST00000479573 241 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 RPL23AP55-201ENST00000498163 452 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 AC106800.3-201ENST00000511389 308 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 AC006427.1-201ENST00000514359 712 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 AC104576.1-201ENST00000524225 88 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 SYF2P1-201ENST00000550658 413 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 TUG1_4.1-201ENST00000619464 181 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 AC097063.1-201ENST00000426714 1797 ntBASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SCAF1Q9H7N4 AC091544.5-201ENST00000620192 3815 ntBASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 RNU6-80P-201ENST00000384195 107 ntBASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 LIN28AP2-201ENST00000445283 458 ntBASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 RPL23AP15-201ENST00000450202 459 ntBASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 AC022133.1-201ENST00000490961 571 ntBASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 AC074250.1-201ENST00000511117 192 ntBASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
SCAF1Q9H7N4 MIR4271-201ENST00000582451 67 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms