Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AP001541.1-201ENST00000623322 1904 ntBASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PHACTR1Q9C0D0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC097063.1-201ENST00000426714 1797 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 Y_RNA.100-201ENST00000363141 102 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 Y_RNA.231-201ENST00000364358 102 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 RNU6-639P-201ENST00000384074 107 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 RNU6-907P-201ENST00000390924 102 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 RPL12P23-201ENST00000405880 490 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 RPL31P52-201ENST00000407532 367 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 HSPE1P1-201ENST00000421494 318 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 HMGB1P4-201ENST00000455362 567 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AKR1D1P1-201ENST00000457236 936 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 SUMO2P4-201ENST00000504193 276 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC105417.1-201ENST00000514691 285 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 HMGB1P42-201ENST00000532126 553 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 HAUS8P1-201ENST00000549005 542 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 TPRX1P1-201ENST00000557620 319 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AL353997.4-201ENST00000586196 166 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC115085.1-201ENST00000588924 229 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 RPL7AP69-201ENST00000595306 806 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 DPPA3P3-201ENST00000603842 430 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AP001330.4-201ENST00000604350 154 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC073046.2-201ENST00000604756 527 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC130324.3-201ENST00000614165 542 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AC010266.2-201ENST00000564741 3255 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 HSPA8P18-201ENST00000439846 1928 ntBASIC6.37□□□□□ -1.39
PHACTR1Q9C0D0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 AC092447.10-201ENST00000620607 1652 ntBASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 AL359922.3-201ENST00000624779 1670 ntBASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 Y_RNA.133-201ENST00000363428 110 ntBASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 RNU1-85P-201ENST00000364127 164 ntBASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 RNA5SP394-201ENST00000364216 119 ntBASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 RNU6-831P-201ENST00000384548 107 ntBASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 ARF4P3-201ENST00000397387 509 ntBASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 Y_RNA.615-201ENST00000410769 117 ntBASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 PRELID3BP11-201ENST00000414230 479 ntBASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 AC245054.2-201ENST00000415639 319 ntBASIC6.36□□□□□ -1.39
PHACTR1Q9C0D0 PTPN2P1-201ENST00000423212 1072 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms