Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MIR5187-201ENST00000583479 76 ntBASIC5.4□□□□□ -1.54
SIN3AQ96ST3 AC018645.2-201ENST00000609151 472 ntBASIC5.4□□□□□ -1.54
SIN3AQ96ST3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SIN3AQ96ST3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SIN3AQ96ST3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.4□□□□□ -1.55
SIN3AQ96ST3 AC006042.3-201ENST00000454684 1469 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 RNU4-44P-201ENST00000363050 141 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 HMGN2P8-201ENST00000391458 268 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 RN7SKP202-201ENST00000410439 330 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 SYF2P2-201ENST00000417620 583 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AL591623.2-201ENST00000449978 222 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 RPS6P2-201ENST00000454208 705 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 NPM1P17-201ENST00000479221 602 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 ACTR3P3-201ENST00000480448 893 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 SUMO1P1-201ENST00000497904 306 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 UBE2CP3-201ENST00000502715 450 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AC004069.2-201ENST00000505438 1114 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 SAP18P1-201ENST00000512058 390 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 OR7E13P-201ENST00000526052 910 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AC068339.2-201ENST00000534395 618 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AC023161.2-201ENST00000551218 780 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AL020997.2-201ENST00000602607 184 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AC016957.2-201ENST00000616998 848 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 MIR4727-201ENST00000622232 55 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AP000943.4-201ENST00000622912 357 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AL356863.1-201ENST00000623378 1080 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AC090617.9-201ENST00000623751 147 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 FRG1DP-201ENST00000635586 771 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 MTND4P9-201ENST00000507819 1346 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 AL122126.1-201ENST00000546905 1318 ntBASIC5.39□□□□□ -1.55
SIN3AQ96ST3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIN3AQ96ST3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC006504.1-201ENST00000562493 3666 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 ZNF285B-201ENST00000561698 1767 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 RNA5SP424-201ENST00000390988 115 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AL590704.1-201ENST00000402856 794 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 BTF3P9-201ENST00000418784 283 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 OR5AW1P-201ENST00000426334 1006 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC098824.1-201ENST00000453565 980 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC126365.2-201ENST00000580630 379 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC093227.2-201ENST00000589357 285 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC133794.1-201ENST00000602731 914 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 MTATP6P2-201ENST00000603319 678 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AL049634.3-201ENST00000604968 457 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AL391834.2-201ENST00000609982 546 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AL138955.1-201ENST00000622881 1040 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC092159.4-201ENST00000624944 550 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AL359715.4-201ENST00000606629 1436 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 AC007656.2-201ENST00000624902 4547 ntBASIC5.38□□□□□ -1.55
SIN3AQ96ST3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIN3AQ96ST3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
SIN3AQ96ST3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
SIN3AQ96ST3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIN3AQ96ST3 RNU6-31P-201ENST00000384388 108 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms