Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 RPL7P6-201ENST00000480903 738 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 RPL32P9-201ENST00000487963 407 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 CBX3P3-201ENST00000508108 532 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC021146.3-201ENST00000511911 260 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 OR5AK1P-201ENST00000524837 922 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC068714.1-201ENST00000559623 800 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC018552.1-201ENST00000562099 811 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC012414.6-201ENST00000568241 401 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC138915.2-201ENST00000569776 97 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 MTCYBP22-201ENST00000603788 447 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC092354.1-201ENST00000606057 376 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC018755.4-201ENST00000619715 454 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AL359740.1-201ENST00000624340 592 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AL356121.2-201ENST00000624715 780 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC116563.2-201ENST00000624751 535 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 MKKS-204ENST00000639674 192 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC099063.3-201ENST00000642066 185 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC022031.1-201ENST00000585985 2593 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX18Q96RF0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC109780.1-201ENST00000451768 1344 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC107982.1-201ENST00000507171 1300 ntBASIC4.68□□□□□ -1.66
SNX18Q96RF0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX18Q96RF0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX18Q96RF0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX18Q96RF0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 LINC01355-201ENST00000566551 5444 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC097461.1-201ENST00000568928 2821 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 Y_RNA.359-201ENST00000365498 102 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 SUGT1P1-201ENST00000379514 476 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 Y_RNA.517-201ENST00000384551 106 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 MIR223-201ENST00000385204 110 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 ATP5F1P4-201ENST00000397288 746 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AL121834.1-202ENST00000404494 277 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AL133325.1-201ENST00000421090 382 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC104634.1-201ENST00000452720 462 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 MTCO3P11-201ENST00000455103 774 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 SRRM1P2-201ENST00000464531 1192 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC079140.3-201ENST00000511111 550 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 MTCO1P30-201ENST00000515244 580 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 RNU6-720P-201ENST00000516363 108 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC105031.1-201ENST00000518550 476 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AF279873.1-201ENST00000523393 313 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AL049779.2-201ENST00000553847 315 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC008507.1-201ENST00000587506 734 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC239868.4-201ENST00000608318 671 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC243654.2-201ENST00000612843 443 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC010678.1-201ENST00000614118 713 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 AC015540.1-201ENST00000615828 501 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms