Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RNU7-140P-201ENST00000459546 60 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 AC126121.1-201ENST00000482313 553 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 RN7SL812P-201ENST00000493791 279 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 AL352979.3-201ENST00000553515 247 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 AC084783.1-201ENST00000565846 910 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 AC109446.2-201ENST00000567872 497 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 CYP4A43P-201ENST00000568156 121 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 AC006272.2-201ENST00000594725 163 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 AP003392.5-201ENST00000607857 415 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 AC090116.1-201ENST00000615679 446 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 MLECP1-201ENST00000615893 709 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 MIR6830-201ENST00000636015 70 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 LINC02211-204ENST00000642024 1070 ntBASIC4.47□□□□□ -1.69
RTP4Q96DX8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RTP4Q96DX8 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RTP4Q96DX8 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RTP4Q96DX8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.69
RTP4Q96DX8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.46□□□□□ -1.69
RTP4Q96DX8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.46□□□□□ -1.69
RTP4Q96DX8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.46□□□□□ -1.69
RTP4Q96DX8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.46□□□□□ -1.69
RTP4Q96DX8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTP4Q96DX8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC111188.2-201ENST00000529697 1387 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 ANKRD36P1-201ENST00000344424 659 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 RNA5SP52-201ENST00000362448 134 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 RNA5SP27-201ENST00000363839 119 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 RNA5SP28-201ENST00000363841 119 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 RNU6-353P-201ENST00000364266 108 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 SNORD66.1-201ENST00000391230 76 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 HMGB3P18-201ENST00000406327 590 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 HNRNPDP2-201ENST00000406475 478 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 MTND4P22-201ENST00000413116 1169 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RTP4Q96DX8 RPS23P10-201ENST00000416185 486 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 PTP4A1P5-201ENST00000420305 455 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 OR6K4P-201ENST00000423179 955 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 FO393419.3-201ENST00000428741 282 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AL008629.1-201ENST00000438615 184 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 HMGB3P6-201ENST00000444896 598 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 SEPT7P3-201ENST00000455017 621 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 NECAP1P2-201ENST00000455668 727 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 RPL7P32-201ENST00000457119 744 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 RPL7AP10-201ENST00000481016 791 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC023050.1-201ENST00000498198 304 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC083829.1-201ENST00000503756 657 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 ATP1B1P1-201ENST00000509767 915 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC093840.1-201ENST00000511599 336 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 MRPS33P3-201ENST00000513456 322 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 RNU6-1129P-201ENST00000515964 104 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RTP4Q96DX8 MTND2P26-201ENST00000528255 1029 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 AL358913.1-201ENST00000554342 121 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTP4Q96DX8 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC018618.2-201ENST00000604770 446 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC012557.2-201ENST00000605919 418 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 MIR432-201ENST00000606207 94 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 OR2BH1P-201ENST00000608850 864 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 TUSC7.1-201ENST00000610969 165 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC005962.2-201ENST00000611427 652 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 FP325313.1-201ENST00000638228 703 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.46□□□□□ -1.7
RTP4Q96DX8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTP4Q96DX8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTP4Q96DX8 VPS35P1-201ENST00000563400 1518 ntBASIC4.46□□□□□ -1.7
RTP4Q96DX8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTP4Q96DX8 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms